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RPS29P4 Gene(Pseudogene)

Ribosomal Protein S29 Pseudogene 4

GCID:
GC01P175297
GIFtS:
9
Genes Participants
UDN Logo

Aliases for RPS29P4 Gene

Aliases for RPS29P4 Gene

  • Ribosomal Protein S29 Pseudogene 4 2 3 5
  • RPS29_3_129 3

External Ids for RPS29P4 Gene

Previous GeneCards Identifiers for RPS29P4 Gene

  • GC01U902309
  • GC01P175267

Summaries for RPS29P4 Gene

GeneCards Summary for RPS29P4 Gene

RPS29P4 (Ribosomal Protein S29 Pseudogene 4) is a Pseudogene.

Additional gene information for RPS29P4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS29P4 Gene

Genomics for RPS29P4 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for RPS29P4 Gene

Promoters and enhancers for RPS29P4 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH01I175266 Enhancer 0.8 Ensembl ENCODE 0.3 -28.3 -28324 4.2 FOSL1 CTBP1 JUND GATA3 RXRA DPF2 FOS NR2F2 KIAA0040 RPS29P4 GC01P175221
GH01I175220 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.2 -75.1 -75100 2.8 CTCF PKNOX1 NFATC3 TEAD4 HLF MAFG REST RAD21 NR2F2 ZNF395 GC01P175221 COP1 KIAA0040 RPS29P4
GH01I175287 Enhancer 0.5 ENCODE 0.4 -8.8 -8846 1.4 SREBF1 USF1 FOXA2 POLR2A KIAA0040 RPS29P4 GC01P175221
GH01I175225 Enhancer 0.8 ENCODE dbSUPER 0.2 -71.3 -71340 0.2 NR2F1 EBF1 DPF2 RELA TARDBP IKZF1 NR2C1 RUNX3 NR2C2 GC01P175221 RPS29P4
GH01I175235 Enhancer 0.5 dbSUPER 0.2 -60.3 -60304 2.6 TRIM22 NBN ATF7 MLLT1 KIAA0040 GC01P175221 RPS29P4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS29P4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS29P4 Gene

Genomic Locations for RPS29P4 Gene
chr1:175,297,080-175,297,241
(GRCh38/hg38)
Size:
162 bases
Orientation:
Plus strand
chr1:175,266,216-175,266,377
(GRCh37/hg19)

Genomic View for RPS29P4 Gene

Genes around RPS29P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS29P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS29P4 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPS29P4 Gene

Proteins for RPS29P4 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPS29P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS29P4 Gene

Domains & Families for RPS29P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS29P4 Gene

Function for RPS29P4 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS29P4 Gene

Localization for RPS29P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS29P4 Gene

Pathways & Interactions for RPS29P4 Gene

SuperPathways for RPS29P4 Gene

PathCards logo More details on SuperPathways for RPS29P4
No Data Available

Interacting Proteins for RPS29P4 Gene

Gene Ontology (GO) - Biological Process for RPS29P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS29P4 Gene

Drugs & Compounds for RPS29P4 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPS29P4 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RPS29P4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS29P4 Gene

No ASD Table

Relevant External Links for RPS29P4 Gene

GeneLoc Exon Structure for
RPS29P4
ECgene alternative splicing isoforms for
RPS29P4

Expression for RPS29P4 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS29P4 Gene

mRNA expression in normal human tissues for RPS29P4 Gene
mRNA expression by GTEx for RPS29P4 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS29P4 Gene:

RPS29P4
genes like me logo Genes that share expression patterns with RPS29P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS29P4 Gene

Orthologs for RPS29P4 Gene

Evolution for RPS29P4 Gene

ENSEMBL:
Gene Tree for RPS29P4 (if available)
TreeFam:
Gene Tree for RPS29P4 (if available)

No data available for Orthologs for RPS29P4 Gene

Paralogs for RPS29P4 Gene

No data available for Paralogs for RPS29P4 Gene

Variants for RPS29P4 Gene

Additional Variant Information for RPS29P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS29P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS29P4 Gene

Disorders for RPS29P4 Gene

No disorders were found for RPS29P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS29P4 Gene

Publications for RPS29P4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS29P4 Gene

Sources for RPS29P4 Gene

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