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Aliases for RPS29P21 Gene

Aliases for RPS29P21 Gene

  • Ribosomal Protein S29 Pseudogene 21 2 3 5
  • RPS29_16_1562 3

External Ids for RPS29P21 Gene

Previous GeneCards Identifiers for RPS29P21 Gene

  • GC17P055345
  • GC17P057990

Summaries for RPS29P21 Gene

GeneCards Summary for RPS29P21 Gene

RPS29P21 (Ribosomal Protein S29 Pseudogene 21) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS29P21 Gene

Genomics for RPS29P21 Gene

Regulatory Elements for RPS29P21 Gene

Enhancers for RPS29P21 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17F059899 0.9 ENCODE 11.9 -12.9 -12869 0.2 CTCF PKNOX1 ATF1 ZNF384 ZNF2 FOXK2 PRDM10 ZNF362 HLF SIX5 LOC101927755 DHX40P1 TBC1D3P1 TBC1D3P1-DHX40P1 SPDYE22P KRT18P61 RPS29P21 RNU6-450P MIR21 PTRH2
GH17F059564 0.2 ENCODE 11.6 -346.2 -346224 2.1 CREB3L1 YBX1 DMAP1 SLC30A9 ZNF416 ZNF143 ZNF263 SP3 NFYC MEF2D NDUFB8P2 DHX40 SMG8 APPBP2 TBC1D3P1 TBC1D3P1-DHX40P1 SPDYE22P DHX40P1 RPS6KB1 RPS29P21
GH17F060598 0.6 FANTOM5 ENCODE 11.6 +688.7 688718 4.9 MLX CREB3L1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC RPS6KB1 C17orf82 PPM1D KRT18P61 DHX40P1 TBC1D3P1 TBC1D3P1-DHX40P1 ENSG00000266934 TBX2-AS1 RPS29P21
GH17F059219 1.1 ENCODE 11.6 -691.6 -691599 1.7 ARID4B SIN3A DMAP1 ZNF2 ZNF143 ZNF207 ZNF263 ZHX2 REST KAT8 SPDYE22P TBC1D3P1 TBC1D3P1-DHX40P1 DHX40P1 SETP3 RPS29P21 MIR454 IGBP1P2 RAD51C SKA2
GH17F059209 1.1 ENCODE 11.6 -701.8 -701826 2.1 CREB3L1 MLX ZFP64 YBX1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 RPS6KB1 NDUFB8P2 DHX40 TRIM37 SPDYE22P DHX40P1 TBC1D3P1 TBC1D3P1-DHX40P1 SETP3 RPS29P21
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPS29P21 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS29P21 Gene

Chromosome:
17
Start:
59,912,163 bp from pter
End:
59,912,454 bp from pter
Size:
292 bases
Orientation:
Plus strand

Genomic View for RPS29P21 Gene

Genes around RPS29P21 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS29P21 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS29P21 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS29P21 Gene

Proteins for RPS29P21 Gene

Post-translational modifications for RPS29P21 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS29P21 Gene

Domains & Families for RPS29P21 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS29P21 Gene

Function for RPS29P21 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS29P21 Gene

Localization for RPS29P21 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS29P21 Gene

Pathways & Interactions for RPS29P21 Gene

SuperPathways for RPS29P21 Gene

No Data Available

Interacting Proteins for RPS29P21 Gene

Gene Ontology (GO) - Biological Process for RPS29P21 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS29P21 Gene

Transcripts for RPS29P21 Gene

mRNA/cDNA for RPS29P21 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS29P21 Gene

No ASD Table

Relevant External Links for RPS29P21 Gene

GeneLoc Exon Structure for
RPS29P21
ECgene alternative splicing isoforms for
RPS29P21

Expression for RPS29P21 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS29P21 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS29P21 Gene:

RPS29P21
genes like me logo Genes that share expression patterns with RPS29P21: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS29P21 Gene

Orthologs for RPS29P21 Gene

Evolution for RPS29P21 Gene

ENSEMBL:
Gene Tree for RPS29P21 (if available)
TreeFam:
Gene Tree for RPS29P21 (if available)

No data available for Orthologs for RPS29P21 Gene

Paralogs for RPS29P21 Gene

No data available for Paralogs for RPS29P21 Gene

Variants for RPS29P21 Gene

Relevant External Links for RPS29P21 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS29P21

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS29P21 Gene

Disorders for RPS29P21 Gene

No disorders were found for RPS29P21 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS29P21 Gene

Publications for RPS29P21 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS29P21 Gene

Sources for RPS29P21 Gene

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