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Aliases for RPS29P18 Gene

Aliases for RPS29P18 Gene

  • Ribosomal Protein S29 Pseudogene 18 2 3
  • RPS29_14_993 3
  • RP11-40C6.2 5

External Ids for RPS29P18 Gene

Previous GeneCards Identifiers for RPS29P18 Gene

  • GC09U901265
  • GC09P090141

Summaries for RPS29P18 Gene

GeneCards Summary for RPS29P18 Gene

RPS29P18 (Ribosomal Protein S29 Pseudogene 18) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS29P18 Gene

Genomics for RPS29P18 Gene

Regulatory Elements for RPS29P18 Gene

Enhancers for RPS29P18 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09G087514 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -8.9 -8916 3.0 PKNOX1 ATF1 CREB3L1 TCF12 ZNF766 GATA2 FOS JUNB NCOA1 ZNF592 DAPK1 RPS29P18
GH09G087518 1.5 Ensembl ENCODE dbSUPER 0.4 -5.7 -5679 2.5 PKNOX1 ATF1 ARNT TCF12 ZNF766 ELK1 GATA2 NCOA1 ZNF592 MBD2 DAPK1 RPS29P18
GH09G087535 1.2 ENCODE dbSUPER 0.4 +11.1 11060 2.6 HDAC1 HDGF TBP PKNOX1 TBL1XR1 BMI1 ZBTB40 ELK1 ZNF143 ZNF207 DAPK1 RPS29P18 DAPK1-IT1
GH09G087503 1.2 ENCODE dbSUPER 0.4 -19.9 -19888 3.4 HNRNPUL1 FOXA2 MLX ARID4B YY1 GATA2 FOS ZHX2 MIER2 PPARG DAPK1 RPS29P18
GH09G087509 1.2 ENCODE dbSUPER 0.4 -15.0 -15003 2.3 PKNOX1 ATF1 CREB3L1 TCF12 ZNF766 GATA2 NCOA1 ZNF592 MEF2D MBD2 DAPK1 RPS29P18
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS29P18 on UCSC Golden Path with GeneCards custom track

Promoters for RPS29P18 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000237268 138 399 ZNF423

Genomic Location for RPS29P18 Gene

Chromosome:
9
Start:
87,525,263 bp from pter
End:
87,525,564 bp from pter
Size:
302 bases
Orientation:
Plus strand

Genomic View for RPS29P18 Gene

Genes around RPS29P18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS29P18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS29P18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS29P18 Gene

Proteins for RPS29P18 Gene

Post-translational modifications for RPS29P18 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS29P18 Gene

Domains & Families for RPS29P18 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS29P18 Gene

Function for RPS29P18 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS29P18 Gene

Localization for RPS29P18 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS29P18 Gene

Pathways & Interactions for RPS29P18 Gene

SuperPathways for RPS29P18 Gene

No Data Available

Interacting Proteins for RPS29P18 Gene

Gene Ontology (GO) - Biological Process for RPS29P18 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS29P18 Gene

Drugs & Compounds for RPS29P18 Gene

No Compound Related Data Available

Transcripts for RPS29P18 Gene

mRNA/cDNA for RPS29P18 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS29P18 Gene

No ASD Table

Relevant External Links for RPS29P18 Gene

GeneLoc Exon Structure for
RPS29P18
ECgene alternative splicing isoforms for
RPS29P18

Expression for RPS29P18 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS29P18 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS29P18 Gene:

RPS29P18
genes like me logo Genes that share expression patterns with RPS29P18: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS29P18 Gene

Orthologs for RPS29P18 Gene

Evolution for RPS29P18 Gene

ENSEMBL:
Gene Tree for RPS29P18 (if available)
TreeFam:
Gene Tree for RPS29P18 (if available)

No data available for Orthologs for RPS29P18 Gene

Paralogs for RPS29P18 Gene

No data available for Paralogs for RPS29P18 Gene

Variants for RPS29P18 Gene

Relevant External Links for RPS29P18 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS29P18

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS29P18 Gene

Disorders for RPS29P18 Gene

No disorders were found for RPS29P18 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS29P18 Gene

Publications for RPS29P18 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS29P18 Gene

Sources for RPS29P18 Gene

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