Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPS29P17 Gene

Aliases for RPS29P17 Gene

  • Ribosomal Protein S29 Pseudogene 17 2 3 5
  • RPS29_13_976 3

External Ids for RPS29P17 Gene

Previous GeneCards Identifiers for RPS29P17 Gene

  • GC09P035584
  • GC09P035593

Summaries for RPS29P17 Gene

GeneCards Summary for RPS29P17 Gene

RPS29P17 (Ribosomal Protein S29 Pseudogene 17) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS29P17 Gene

Genomics for RPS29P17 Gene

Regulatory Elements for RPS29P17 Gene

Enhancers for RPS29P17 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F035598 0.6 Ensembl ENCODE 0.4 +6.8 6823 1.9 CTCF SAP130 ARID4B CEBPB CEBPG RAD21 ZNF48 TEAD3 CEBPA ZBTB26 CCDC107 RN7SL22P ARHGEF39 CD72 GC09M035603 RPS29P17
GH09F035602 0.7 FANTOM5 ENCODE 0.4 +11.9 11891 3.6 HDGF PKNOX1 MLX CREB3L1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 CD72 ENSG00000231393 LOC101926948 CCDC107 RN7SL22P ARHGEF39 RUSC2 TMEM8B SPAG8 FAM221B
GH09F035580 0.2 ENCODE 0.4 -11.7 -11674 0.6 GATAD2A SOX13 SOX5 SAP130 FOXA3 ZNF644 RARA TEAD3 CEBPA SMAD4 CCDC107 ARHGEF39 RN7SL22P UNC13B RPS29P17 FAM166B
GH09F035569 1 Ensembl ENCODE 0.3 -22.5 -22547 1.6 ATF3 EED CEBPB HMBOX1 MLLT1 CREM MAFK SPI1 CCDC107 RN7SL22P ARHGEF39 ENSG00000227388 FAM166B RPS29P17
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPS29P17 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS29P17 Gene

Chromosome:
9
Start:
35,592,747 bp from pter
End:
35,593,044 bp from pter
Size:
298 bases
Orientation:
Plus strand

Genomic View for RPS29P17 Gene

Genes around RPS29P17 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS29P17 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS29P17 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS29P17 Gene

Proteins for RPS29P17 Gene

Post-translational modifications for RPS29P17 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS29P17 Gene

Domains & Families for RPS29P17 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS29P17 Gene

Function for RPS29P17 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS29P17 Gene

Localization for RPS29P17 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS29P17 Gene

Pathways & Interactions for RPS29P17 Gene

SuperPathways for RPS29P17 Gene

No Data Available

Interacting Proteins for RPS29P17 Gene

Gene Ontology (GO) - Biological Process for RPS29P17 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS29P17 Gene

Transcripts for RPS29P17 Gene

mRNA/cDNA for RPS29P17 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS29P17 Gene

No ASD Table

Relevant External Links for RPS29P17 Gene

GeneLoc Exon Structure for
RPS29P17
ECgene alternative splicing isoforms for
RPS29P17

Expression for RPS29P17 Gene

mRNA expression in normal human tissues for RPS29P17 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS29P17 Gene:

RPS29P17
genes like me logo Genes that share expression patterns with RPS29P17: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS29P17 Gene

Orthologs for RPS29P17 Gene

Evolution for RPS29P17 Gene

ENSEMBL:
Gene Tree for RPS29P17 (if available)
TreeFam:
Gene Tree for RPS29P17 (if available)

No data available for Orthologs for RPS29P17 Gene

Paralogs for RPS29P17 Gene

No data available for Paralogs for RPS29P17 Gene

Variants for RPS29P17 Gene

Relevant External Links for RPS29P17 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS29P17

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS29P17 Gene

Disorders for RPS29P17 Gene

No disorders were found for RPS29P17 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS29P17 Gene

Publications for RPS29P17 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS29P17 Gene

Sources for RPS29P17 Gene

Content
Loading form....