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Aliases for RPS29P16 Gene

Aliases for RPS29P16 Gene

  • Ribosomal Protein S29 Pseudogene 16 2 3 5
  • RPS29_11_830 3

External Ids for RPS29P16 Gene

Previous GeneCards Identifiers for RPS29P16 Gene

  • GC07P102777
  • GC07P102990

Summaries for RPS29P16 Gene

GeneCards Summary for RPS29P16 Gene

RPS29P16 (Ribosomal Protein S29 Pseudogene 16) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS29P16 Gene

Genomics for RPS29P16 Gene

Regulatory Elements for RPS29P16 Gene

Enhancers for RPS29P16 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F102972 1.3 Ensembl ENCODE 9.9 -374.9 -374943 3.2 HDGF PKNOX1 ATF1 ARNT CREB3L1 YBX1 YY1 ELK1 KDM4B KLF13 CRYZP1 FAM185A FBXL13 PMPCB RPS29P16 ARMC10 RPL23AP95 NFE4 GC07P103004
GH07F103346 1.1 ENCODE 10.6 -0.6 -608 2.2 HDGF PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 CRYZP1 PRKRIP1 RPL23AP95 ENSG00000213385 FAM185A ORC5 PMPCB ALKBH4 RPS29P16 NAPEPLD
GH07F102931 1.1 ENCODE 9.9 -416.6 -416603 0.2 CREB3L1 SIN3A FEZF1 ZNF2 ZNF143 ZNF416 ZNF207 SP3 REST ZFP41 CRYZP1 ENSG00000239486 ENSG00000236226 S100A11P1 PMPCB LRWD1 FAM185A SPDYE2 PRKRIP1 FBXL13
GH07F102572 1.1 ENCODE 9.8 -775.9 -775891 1.2 CREB3L1 SIN3A FEZF1 ZNF2 ZNF416 ZNF143 ZNF207 SP3 REST ZFP41 CRYZP1 ENSG00000213385 FAM185A PMPCB ENSG00000236226 S100A11P1 LRWD1 SPDYE2 ENSG00000239486 UPK3BL
GH07F103704 0.9 FANTOM5 9.9 +356.1 356112 0.0 ATF1 ARNT NFRKB ZBTB40 YY1 ZNF766 ETV6 ZBTB11 ZHX2 ELF1 FAM185A CRYZP1 RPS29P16 SLC26A5 RELN GC07P103686 GC07P103723
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS29P16 on UCSC Golden Path with GeneCards custom track

Promoters for RPS29P16 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000682958 -271 2201 HDGF PKNOX1 ARNT CREB3L1 MLX WRNIP1 ARID4B SIN3A FEZF1 DMAP1

Genomic Location for RPS29P16 Gene

Chromosome:
7
Start:
103,348,571 bp from pter
End:
103,348,859 bp from pter
Size:
289 bases
Orientation:
Plus strand

Genomic View for RPS29P16 Gene

Genes around RPS29P16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS29P16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS29P16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS29P16 Gene

Proteins for RPS29P16 Gene

Post-translational modifications for RPS29P16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS29P16 Gene

Domains & Families for RPS29P16 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS29P16 Gene

Function for RPS29P16 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS29P16 Gene

Localization for RPS29P16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS29P16 Gene

Pathways & Interactions for RPS29P16 Gene

SuperPathways for RPS29P16 Gene

No Data Available

Interacting Proteins for RPS29P16 Gene

Gene Ontology (GO) - Biological Process for RPS29P16 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS29P16 Gene

Transcripts for RPS29P16 Gene

mRNA/cDNA for RPS29P16 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS29P16 Gene

No ASD Table

Relevant External Links for RPS29P16 Gene

GeneLoc Exon Structure for
RPS29P16
ECgene alternative splicing isoforms for
RPS29P16

Expression for RPS29P16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS29P16 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS29P16 Gene:

RPS29P16
genes like me logo Genes that share expression patterns with RPS29P16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS29P16 Gene

Orthologs for RPS29P16 Gene

Evolution for RPS29P16 Gene

ENSEMBL:
Gene Tree for RPS29P16 (if available)
TreeFam:
Gene Tree for RPS29P16 (if available)

No data available for Orthologs for RPS29P16 Gene

Paralogs for RPS29P16 Gene

No data available for Paralogs for RPS29P16 Gene

Variants for RPS29P16 Gene

Relevant External Links for RPS29P16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS29P16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS29P16 Gene

Disorders for RPS29P16 Gene

No disorders were found for RPS29P16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS29P16 Gene

Publications for RPS29P16 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS29P16 Gene

Sources for RPS29P16 Gene

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