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RPS28P3 Gene(Pseudogene)

Ribosomal Protein S28 Pseudogene 3

GCID:
GC01M228134
GIFtS:
9
Genes Participants
UDN Logo

Aliases for RPS28P3 Gene

Aliases for RPS28P3 Gene

  • Ribosomal Protein S28 Pseudogene 3 2 3
  • RPS28_2_172 3
  • AL359510.1 5

External Ids for RPS28P3 Gene

Previous GeneCards Identifiers for RPS28P3 Gene

  • GC01M226391
  • GC01M228323

Summaries for RPS28P3 Gene

GeneCards Summary for RPS28P3 Gene

RPS28P3 (Ribosomal Protein S28 Pseudogene 3) is a Pseudogene.

Additional gene information for RPS28P3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS28P3 Gene

Genomics for RPS28P3 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for RPS28P3 Gene

Promoters and enhancers for RPS28P3 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH01I228136 Enhancer 0.6 ENCODE dbSUPER 550.8 -0.4 -424 0.7 FOXA2 CBFA2T3 RPS28P3 GC01P228138 FAM96AP2 MRPL55 OBSCN OBSCN-AS1 RPL23AP15 HIST3H2A HIST3H2BB
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS28P3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS28P3 Gene

Genomic Locations for RPS28P3 Gene
chr1:228,134,782-228,136,793
(GRCh38/hg38)
Size:
2,012 bases
Orientation:
Minus strand
chr1:228,322,483-228,324,494
(GRCh37/hg19)

Genomic View for RPS28P3 Gene

Genes around RPS28P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS28P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS28P3 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPS28P3 Gene

Proteins for RPS28P3 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPS28P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS28P3 Gene

Domains & Families for RPS28P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS28P3 Gene

Function for RPS28P3 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS28P3 Gene

Localization for RPS28P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS28P3 Gene

Pathways & Interactions for RPS28P3 Gene

SuperPathways for RPS28P3 Gene

PathCards logo More details on SuperPathways for RPS28P3
No Data Available

Interacting Proteins for RPS28P3 Gene

Gene Ontology (GO) - Biological Process for RPS28P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS28P3 Gene

Drugs & Compounds for RPS28P3 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPS28P3 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RPS28P3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS28P3 Gene

No ASD Table

Relevant External Links for RPS28P3 Gene

GeneLoc Exon Structure for
RPS28P3
ECgene alternative splicing isoforms for
RPS28P3

Expression for RPS28P3 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS28P3 Gene

mRNA expression in normal human tissues for RPS28P3 Gene
mRNA expression by GTEx for RPS28P3 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS28P3 Gene:

RPS28P3
genes like me logo Genes that share expression patterns with RPS28P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS28P3 Gene

Orthologs for RPS28P3 Gene

Evolution for RPS28P3 Gene

ENSEMBL:
Gene Tree for RPS28P3 (if available)
TreeFam:
Gene Tree for RPS28P3 (if available)

No data available for Orthologs for RPS28P3 Gene

Paralogs for RPS28P3 Gene

No data available for Paralogs for RPS28P3 Gene

Variants for RPS28P3 Gene

Additional Variant Information for RPS28P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS28P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS28P3 Gene

Disorders for RPS28P3 Gene

No disorders were found for RPS28P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS28P3 Gene

Publications for RPS28P3 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS28P3 Gene

Sources for RPS28P3 Gene

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