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Aliases for RPS28P2 Gene

Aliases for RPS28P2 Gene

  • Ribosomal Protein S28 Pseudogene 2 2 3
  • RP11-348H3.5 5
  • RPS28_1_163 3

External Ids for RPS28P2 Gene

Previous GeneCards Identifiers for RPS28P2 Gene

  • GC01U902289
  • GC01M213029

Summaries for RPS28P2 Gene

GeneCards Summary for RPS28P2 Gene

RPS28P2 (Ribosomal Protein S28 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS28P2 Gene

Genomics for RPS28P2 Gene

Regulatory Elements for RPS28P2 Gene

Enhancers for RPS28P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F212789 1.2 ENCODE 11.7 +63.8 63770 4.4 CREB3L1 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 FLVCR1 FLVCR1-AS1 TATDN3 RPL21P28 LOC105372907 ENSG00000225233 LOC105372912 ANGEL2 RPS28P2 ENSG00000235182
GH01F212819 1.1 FANTOM5 Ensembl ENCODE 12.6 +35.7 35666 1.4 PKNOX1 TBL1XR1 MTA2 IKZF1 TCF7 CREM RELA FLVCR1-AS1 ENSG00000235182 FLVCR1 RPS28P2 TATDN3 VASH2 BATF3 RPS5P4
GH01F212827 0.9 ENCODE 13.3 +27.3 27297 2.1 ATF1 MLX ARID4B THRB RARA GATA4 CREM MIXL1 HMG20B PPARG FLVCR1-AS1 ENSG00000235182 RPS28P2 FLVCR1 TATDN3 VASH2 BATF3 GC01P212825 GC01P212844
GH01F212995 0.8 ENCODE 11.2 -140.3 -140298 0.1 CTCF PKNOX1 ARNT HINFP BACH1 ZNF384 RAD21 RFX5 CHAMP1 ZNF316 VASH2 FLVCR1 FLVCR1-AS1 ENSG00000235182 RPS28P2 BATF3 ANGEL2
GH01F212832 0.7 ENCODE 12.5 +21.7 21654 2.2 PKNOX1 MTA2 HLF JUNB TBX21 RAD51 IKZF1 TCF7 SMAD4 ETV6 FLVCR1-AS1 FLVCR1 RPS28P2 TATDN3 VASH2 SPATA45 NSL1 GC01P212825 GC01P212844
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS28P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS28P2 Gene

Chromosome:
1
Start:
212,855,169 bp from pter
End:
212,855,366 bp from pter
Size:
198 bases
Orientation:
Minus strand

Genomic View for RPS28P2 Gene

Genes around RPS28P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS28P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS28P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS28P2 Gene

Proteins for RPS28P2 Gene

Post-translational modifications for RPS28P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS28P2 Gene

Domains & Families for RPS28P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS28P2 Gene

Function for RPS28P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS28P2 Gene

Localization for RPS28P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS28P2 Gene

Pathways & Interactions for RPS28P2 Gene

SuperPathways for RPS28P2 Gene

No Data Available

Interacting Proteins for RPS28P2 Gene

Gene Ontology (GO) - Biological Process for RPS28P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS28P2 Gene

Transcripts for RPS28P2 Gene

mRNA/cDNA for RPS28P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS28P2 Gene

No ASD Table

Relevant External Links for RPS28P2 Gene

GeneLoc Exon Structure for
RPS28P2
ECgene alternative splicing isoforms for
RPS28P2

Expression for RPS28P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS28P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS28P2 Gene:

RPS28P2
genes like me logo Genes that share expression patterns with RPS28P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS28P2 Gene

Orthologs for RPS28P2 Gene

Evolution for RPS28P2 Gene

ENSEMBL:
Gene Tree for RPS28P2 (if available)
TreeFam:
Gene Tree for RPS28P2 (if available)

No data available for Orthologs for RPS28P2 Gene

Paralogs for RPS28P2 Gene

No data available for Paralogs for RPS28P2 Gene

Variants for RPS28P2 Gene

Relevant External Links for RPS28P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS28P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS28P2 Gene

Disorders for RPS28P2 Gene

No disorders were found for RPS28P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS28P2 Gene

Publications for RPS28P2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS28P2 Gene

Sources for RPS28P2 Gene

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