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Aliases for RPS27P9 Gene

Aliases for RPS27P9 Gene

  • Ribosomal Protein S27 Pseudogene 9 2 3
  • RPS27_1_33 3
  • AL034379.1 5

External Ids for RPS27P9 Gene

Previous GeneCards Identifiers for RPS27P9 Gene

  • GC01P037797
  • GC01P038022

Summaries for RPS27P9 Gene

GeneCards Summary for RPS27P9 Gene

RPS27P9 (Ribosomal Protein S27 Pseudogene 9) is a Pseudogene.

Additional gene information for RPS27P9 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS27P9 Gene

Genomics for RPS27P9 Gene

Regulatory Elements for RPS27P9 Gene

Enhancers for RPS27P9 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H037533 1.3 Ensembl ENCODE 11.9 -21.6 -21583 2 FOXA2 ATF1 ARID4B SIN3A YY1 ATF7 FOS SP3 ZHX2 TSHZ1 RPS27P9 DNALI1 MEAF6 LINC01137 LOC105378649 FTH1P1
GH01H037513 1.1 ENCODE 11.3 -41.6 -41584 2 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 CBX5 ZNF143 SF3A3 GNL2 DNALI1 FTH1P1 MEAF6 SNIP1 RPS27P9 YRDC C1orf109 LINC01137
GH01H037448 0.9 Ensembl ENCODE 10.7 -106.9 -106932 2 ZFHX2 GATA3 ZNF341 ZKSCAN8 CREB1 KDM1A FOS WT1 EGR2 SPI1 LINC01137 ZC3H12A SNIP1 DNALI1 RPS27P9 RSPO1 MEAF6 GC01M037470 PIR53142
GH01H037497 0.8 ENCODE dbSUPER 11 -58.2 -58173 0 NFIB NFIA YY2 ZNF10 ZNF600 ZFX YY1 ZC3H12A LINC01137 DNALI1 SNIP1 RPS27P9 MIR5581 PIR46555
GH01H037507 0.8 ENCODE dbSUPER 10.7 -48.1 -48096 0 EED IKZF1 JUNB BATF IKZF2 DNALI1 LINC01137 ZC3H12A RPS27P9 SNIP1 GNL2 MIR5581 MEAF6
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS27P9 on UCSC Golden Path with GeneCards custom track

Promoters for RPS27P9 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000004862 685 201 TBP HDGF MXI1 SAP130 ARID4B MAX BMI1 ZNF644 KMT2B RAD21

Genomic Location for RPS27P9 Gene

Chromosome:
1
Start:
37,556,215 bp from pter
End:
37,556,553 bp from pter
Size:
339 bases
Orientation:
Plus strand

Genomic View for RPS27P9 Gene

Genes around RPS27P9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS27P9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS27P9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS27P9 Gene

Proteins for RPS27P9 Gene

Post-translational modifications for RPS27P9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS27P9 Gene

Domains & Families for RPS27P9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS27P9 Gene

Function for RPS27P9 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS27P9
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS27P9 Gene

Localization for RPS27P9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS27P9 Gene

Pathways & Interactions for RPS27P9 Gene

SuperPathways for RPS27P9 Gene

No Data Available

Interacting Proteins for RPS27P9 Gene

Gene Ontology (GO) - Biological Process for RPS27P9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS27P9 Gene

Drugs & Compounds for RPS27P9 Gene

No Compound Related Data Available

Transcripts for RPS27P9 Gene

mRNA/cDNA for RPS27P9 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS27P9
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPS27P9 Gene

No ASD Table

Relevant External Links for RPS27P9 Gene

GeneLoc Exon Structure for
RPS27P9
ECgene alternative splicing isoforms for
RPS27P9

Expression for RPS27P9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS27P9 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS27P9 Gene:

RPS27P9
genes like me logo Genes that share expression patterns with RPS27P9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS27P9 Gene

Orthologs for RPS27P9 Gene

Evolution for RPS27P9 Gene

ENSEMBL:
Gene Tree for RPS27P9 (if available)
TreeFam:
Gene Tree for RPS27P9 (if available)

No data available for Orthologs for RPS27P9 Gene

Paralogs for RPS27P9 Gene

No data available for Paralogs for RPS27P9 Gene

Variants for RPS27P9 Gene

Relevant External Links for RPS27P9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS27P9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS27P9 Gene

Disorders for RPS27P9 Gene

No disorders were found for RPS27P9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS27P9 Gene

Publications for RPS27P9 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPS27P9 Gene

Sources for RPS27P9 Gene

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