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Aliases for RPS27P9 Gene

Aliases for RPS27P9 Gene

  • Ribosomal Protein S27 Pseudogene 9 2 3
  • RP3-423B22.5 5
  • RPS27_1_33 3

External Ids for RPS27P9 Gene

Previous GeneCards Identifiers for RPS27P9 Gene

  • GC01P037797
  • GC01P038022

Summaries for RPS27P9 Gene

GeneCards Summary for RPS27P9 Gene

RPS27P9 (Ribosomal Protein S27 Pseudogene 9) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS27P9 Gene

Genomics for RPS27P9 Gene

Regulatory Elements for RPS27P9 Gene

Enhancers for RPS27P9 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G037533 1.4 Ensembl ENCODE 11.9 -21.6 -21583 2.4 HDGF FOXA2 CREB3L1 ARNT SIN3A ARID4B YY1 ZNF766 FOS SP3 RPS27P9 DNALI1 MEAF6 LINC01137 LOC105378649 FTH1P1
GH01G037513 1.1 ENCODE 11.3 -41.6 -41584 2.6 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 CBX5 SNIP1 GNL2 SF3A3 DNALI1 MEAF6 RPS27P9 FTH1P1 LINC01137 MIR5581
GH01G037448 1.1 Ensembl ENCODE 10.7 -106.9 -106932 2.3 SOX13 DRAP1 CTCF FOXA2 SAP130 ZNF792 JUN ARID4B ZNF644 ZFHX2 LINC01137 ZC3H12A DNALI1 RPS27P9 SNIP1 RSPO1 MEAF6 GC01M037470 PIR53142
GH01G037507 0.9 ENCODE dbSUPER 10.7 -48.1 -48096 0.9 BCOR ZNF146 BHLHE40 JUNB IKZF1 EED ZNF580 KDM1A IKZF2 DNALI1 LINC01137 ZC3H12A RPS27P9 SNIP1 GNL2 MEAF6 MIR5581
GH01G037497 0.8 ENCODE dbSUPER 11 -58.2 -58173 0.1 NFIB NFIA YY2 ZNF10 ZNF600 ZFX YY1 LINC01137 ZC3H12A RPS27P9 SNIP1 DNALI1 MIR5581 PIR46555
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS27P9 on UCSC Golden Path with GeneCards custom track

Promoters for RPS27P9 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000004862 685 201 TBP HDGF ARID4B BMI1 RAD21 YY1 ZNF766 EGR1 IKZF2 EGR2

Genomic Location for RPS27P9 Gene

Chromosome:
1
Start:
37,556,215 bp from pter
End:
37,556,553 bp from pter
Size:
339 bases
Orientation:
Plus strand

Genomic View for RPS27P9 Gene

Genes around RPS27P9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS27P9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS27P9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS27P9 Gene

Proteins for RPS27P9 Gene

Post-translational modifications for RPS27P9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS27P9 Gene

Domains & Families for RPS27P9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS27P9 Gene

Function for RPS27P9 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS27P9 Gene

Localization for RPS27P9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS27P9 Gene

Pathways & Interactions for RPS27P9 Gene

SuperPathways for RPS27P9 Gene

No Data Available

Interacting Proteins for RPS27P9 Gene

Gene Ontology (GO) - Biological Process for RPS27P9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS27P9 Gene

Drugs & Compounds for RPS27P9 Gene

No Compound Related Data Available

Transcripts for RPS27P9 Gene

mRNA/cDNA for RPS27P9 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS27P9 Gene

No ASD Table

Relevant External Links for RPS27P9 Gene

GeneLoc Exon Structure for
RPS27P9
ECgene alternative splicing isoforms for
RPS27P9

Expression for RPS27P9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS27P9 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS27P9 Gene:

RPS27P9
genes like me logo Genes that share expression patterns with RPS27P9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS27P9 Gene

Orthologs for RPS27P9 Gene

Evolution for RPS27P9 Gene

ENSEMBL:
Gene Tree for RPS27P9 (if available)
TreeFam:
Gene Tree for RPS27P9 (if available)

No data available for Orthologs for RPS27P9 Gene

Paralogs for RPS27P9 Gene

No data available for Paralogs for RPS27P9 Gene

Variants for RPS27P9 Gene

Relevant External Links for RPS27P9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS27P9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS27P9 Gene

Disorders for RPS27P9 Gene

No disorders were found for RPS27P9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS27P9 Gene

Publications for RPS27P9 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS27P9 Gene

Sources for RPS27P9 Gene

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