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Aliases for RPS27P6 Gene

Aliases for RPS27P6 Gene

  • Ribosomal Protein S27 Pseudogene 6 2 3
  • RP11-20O24.1 5
  • RPS27_2_83 3

External Ids for RPS27P6 Gene

Previous GeneCards Identifiers for RPS27P6 Gene

  • GC01P109376
  • GC01P109573

Summaries for RPS27P6 Gene

GeneCards Summary for RPS27P6 Gene

RPS27P6 (Ribosomal Protein S27 Pseudogene 6) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS27P6 Gene

Genomics for RPS27P6 Gene

Regulatory Elements for RPS27P6 Gene

Enhancers for RPS27P6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F109482 1.2 ENCODE 44.7 +454.1 454072 2.3 HDGF PKNOX1 ARNT ARID4B SIN3A YBX1 FEZF1 DMAP1 ZNF2 YY1 RPL17P7 ENSG00000258634 PRPF38B RPS27P6 SYPL2 GSTM2 ENSG00000273373 ENSG00000235005 ENSG00000232971 GSTM5
GH01F109863 1.8 FANTOM5 Ensembl ENCODE 24.3 +834.8 834843 2.4 MLX CREB3L1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC RPL17P7 RPS27P6 GSTM2 GSTM3 CSF1 ENSG00000235005 ENSG00000258634 GSTM5 GNAI3 GC01P109862
GH01F109088 1.2 ENCODE 22.5 +61.1 61050 4.6 CREB3L1 MLX FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC TBX21 C1orf194 ENSG00000258634 RPL17P7 RPS27P6 GNAI3 PRPF38B GSTM2 RANP5 WDR47 TMEM167B
GH01F109099 1.2 ENCODE 22.1 +70.4 70440 1.9 CREB3L1 MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 MEF2D ENSG00000258634 RPL17P7 RPS27P6 ENSG00000232971 SLC25A24P2 ENSG00000238122 ENSG00000235005 GNAI3 C1orf194 GSTM2
GH01F108556 1.6 FANTOM5 ENCODE 12.4 -471.2 -471173 5.7 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 RPL17P7 SLC25A24P2 ENSG00000232971 ENSG00000238122 RPS27P6 PRPF38B FAM102B SLC25A24 LOC100420170
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS27P6 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS27P6 Gene

Chromosome:
1
Start:
109,030,032 bp from pter
End:
109,030,376 bp from pter
Size:
345 bases
Orientation:
Plus strand

Genomic View for RPS27P6 Gene

Genes around RPS27P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS27P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS27P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS27P6 Gene

Proteins for RPS27P6 Gene

Post-translational modifications for RPS27P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS27P6 Gene

Domains & Families for RPS27P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS27P6 Gene

Function for RPS27P6 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS27P6 Gene

Localization for RPS27P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS27P6 Gene

Pathways & Interactions for RPS27P6 Gene

SuperPathways for RPS27P6 Gene

No Data Available

Interacting Proteins for RPS27P6 Gene

Gene Ontology (GO) - Biological Process for RPS27P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS27P6 Gene

Transcripts for RPS27P6 Gene

mRNA/cDNA for RPS27P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS27P6 Gene

No ASD Table

Relevant External Links for RPS27P6 Gene

GeneLoc Exon Structure for
RPS27P6
ECgene alternative splicing isoforms for
RPS27P6

Expression for RPS27P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS27P6 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS27P6 Gene:

RPS27P6
genes like me logo Genes that share expression patterns with RPS27P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS27P6 Gene

Orthologs for RPS27P6 Gene

Evolution for RPS27P6 Gene

ENSEMBL:
Gene Tree for RPS27P6 (if available)
TreeFam:
Gene Tree for RPS27P6 (if available)

No data available for Orthologs for RPS27P6 Gene

Paralogs for RPS27P6 Gene

No data available for Paralogs for RPS27P6 Gene

Variants for RPS27P6 Gene

Relevant External Links for RPS27P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS27P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS27P6 Gene

Disorders for RPS27P6 Gene

No disorders were found for RPS27P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS27P6 Gene

Publications for RPS27P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS27P6 Gene

Sources for RPS27P6 Gene

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