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Aliases for RPS27P6 Gene

Aliases for RPS27P6 Gene

  • Ribosomal Protein S27 Pseudogene 6 2 3
  • RP11-20O24.1 5
  • RPS27_2_83 3

External Ids for RPS27P6 Gene

Previous GeneCards Identifiers for RPS27P6 Gene

  • GC01P109376
  • GC01P109573

Summaries for RPS27P6 Gene

GeneCards Summary for RPS27P6 Gene

RPS27P6 (Ribosomal Protein S27 Pseudogene 6) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS27P6 Gene

Genomics for RPS27P6 Gene

Regulatory Elements for RPS27P6 Gene

Enhancers for RPS27P6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G109482 1.2 ENCODE 22.3 +454.1 454072 2.3 YBX1 FEZF1 DMAP1 YY1 ZNF143 ZNF548 ZNF263 SP3 NFYC TBX21 ENSG00000258634 RPL17P7 PRPF38B SYPL2 RPS27P6 AMIGO1 ENSG00000273373 GSTM5 UBL4B ATXN7L2
GH01G110002 1.6 Ensembl ENCODE dbSUPER 11.3 +974.1 974074 3.0 PKNOX1 ARNT ARID4B SIN3A FEZF1 ZNF2 YY1 ZNF766 FOS ZNF263 ENSG00000258634 RPS27P6 STRIP1 GSTM3 ENSG00000225113 RNU6V CSF1 UBL4B AHCYL1
GH01G109099 1.4 ENCODE dbSUPER 11.5 +70.4 70440 1.9 MLX CREB3L1 AGO1 ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 ENSG00000258634 RPL17P7 GNAI3 C1orf194 RPS27P6 PRPF38B TMEM167B MYBPHL SCARNA2 LOC100420092
GH01G109088 1.4 ENCODE dbSUPER 10.5 +61.1 61050 4.6 MLX CREB3L1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC TBX21 C1orf194 ENSG00000258634 GNAI3 RPL17P7 PRPF38B RPS27P6 RANP5 WDR47 TMEM167B NDUFB3P1
GH01G108875 1.4 Ensembl ENCODE 10.4 -152.1 -152147 3.9 HNRNPUL1 PKNOX1 CREB3L1 ARNT AGO1 ARID4B SIN3A DMAP1 ZNF2 YY1 RPL17P7 PRPF38B RPS27P6 SPATA42 CLCC1 GPSM2 GC01P108959
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS27P6 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS27P6 Gene

Chromosome:
1
Start:
109,030,032 bp from pter
End:
109,030,376 bp from pter
Size:
345 bases
Orientation:
Plus strand

Genomic View for RPS27P6 Gene

Genes around RPS27P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS27P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS27P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS27P6 Gene

Proteins for RPS27P6 Gene

Post-translational modifications for RPS27P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS27P6 Gene

Domains & Families for RPS27P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS27P6 Gene

Function for RPS27P6 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS27P6 Gene

Localization for RPS27P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS27P6 Gene

Pathways & Interactions for RPS27P6 Gene

SuperPathways for RPS27P6 Gene

No Data Available

Interacting Proteins for RPS27P6 Gene

Gene Ontology (GO) - Biological Process for RPS27P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS27P6 Gene

Drugs & Compounds for RPS27P6 Gene

No Compound Related Data Available

Transcripts for RPS27P6 Gene

mRNA/cDNA for RPS27P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS27P6 Gene

No ASD Table

Relevant External Links for RPS27P6 Gene

GeneLoc Exon Structure for
RPS27P6
ECgene alternative splicing isoforms for
RPS27P6

Expression for RPS27P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS27P6 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS27P6 Gene:

RPS27P6
genes like me logo Genes that share expression patterns with RPS27P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS27P6 Gene

Orthologs for RPS27P6 Gene

Evolution for RPS27P6 Gene

ENSEMBL:
Gene Tree for RPS27P6 (if available)
TreeFam:
Gene Tree for RPS27P6 (if available)

No data available for Orthologs for RPS27P6 Gene

Paralogs for RPS27P6 Gene

No data available for Paralogs for RPS27P6 Gene

Variants for RPS27P6 Gene

Relevant External Links for RPS27P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS27P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS27P6 Gene

Disorders for RPS27P6 Gene

No disorders were found for RPS27P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS27P6 Gene

Publications for RPS27P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS27P6 Gene

Sources for RPS27P6 Gene

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