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Aliases for RPS27P5 Gene

Subcategory (RNA class) for RPS27P5 Gene


Aliases for RPS27P5 Gene

  • Ribosomal Protein S27 Pseudogene 5 2 3 5
  • Ribosomal Protein S27-Like Pseudogene 3
  • RPS27_4_170 3

External Ids for RPS27P5 Gene

ORGUL Members for RPS27P5 Gene

Previous GeneCards Identifiers for RPS27P5 Gene

  • GC01U902312
  • GC01P226970
  • GC01P197486

Summaries for RPS27P5 Gene

GeneCards Summary for RPS27P5 Gene

RPS27P5 (Ribosomal Protein S27 Pseudogene 5) is a Pseudogene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for RPS27P5 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

Additional gene information for RPS27P5 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RPS27P5 Gene

Genomics for RPS27P5 Gene

GeneHancer (GH) Regulatory Elements for RPS27P5 Gene

Promoters and enhancers for RPS27P5 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I226779 Enhancer 0.6 ENCODE dbSUPER 550.8 -1.7 -1716 0.2 ZNF747 EZH2 RPS27P5 ITPKB GC01M226755 GC01M226756 GC01M226757
GH01I226778 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.8 -2.5 -2454 1.3 PKNOX1 INSM2 FEZF1 ZNF335 ZNF366 ZSCAN5C ZNF350 EGR2 YY2 CEBPB ITPKB GC01M226755 GC01M226756 GC01M226757 RPS27P5
GH01I226763 Enhancer 1 Ensembl ENCODE 0.4 -17.0 -17029 2.2 PKNOX1 ATF1 BATF ZNF335 ZSCAN5C FOS RUNX3 CREM ZNF362 CBFB ZNF678 ACBD3 PSEN2 GC01M226757 RPS27P5 GC01M226756 GC01M226755 ITPKB
GH01I226772 Enhancer 0.6 Ensembl 0.4 -8.8 -8800 0.2 NR2F1 EBF1 REST IKZF1 NBN MLLT1 ETV6 RUNX3 IKZF2 COQ8A RPS27P5 GC01M226756 GC01M226757 GC01M226755 ITPKB
GH01I226748 Enhancer 0.4 dbSUPER 0.3 -32.0 -32018 1.5 ZFP3 L3MBTL2 SCRT2 ITPKB-AS1 PSEN2 ITPKB RPS27P5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS27P5 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS27P5 Gene

Genomic Locations for RPS27P5 Gene
245 bases
Plus strand

Genomic View for RPS27P5 Gene

Genes around RPS27P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS27P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS27P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS27P5 Gene

ORGUL Member Location for RPS27P5 Gene

ORGUL Member Location for RPS27P5 gene

Proteins for RPS27P5 Gene

Post-translational modifications for RPS27P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS27P5 Gene

Domains & Families for RPS27P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS27P5 Gene

Function for RPS27P5 Gene

Phenotypes From GWAS Catalog for RPS27P5 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS27P5 Gene

Localization for RPS27P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS27P5 Gene

Pathways & Interactions for RPS27P5 Gene

SuperPathways for RPS27P5 Gene

No Data Available

Interacting Proteins for RPS27P5 Gene

Gene Ontology (GO) - Biological Process for RPS27P5 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPS27P5 Gene

Drugs & Compounds for RPS27P5 Gene

No Compound Related Data Available

Transcripts for RPS27P5 Gene

mRNA/cDNA for RPS27P5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS27P5 Gene

No ASD Table

Relevant External Links for RPS27P5 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPS27P5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS27P5 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS27P5 Gene:

genes like me logo Genes that share expression patterns with RPS27P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS27P5 Gene

Orthologs for RPS27P5 Gene

Evolution for RPS27P5 Gene

Gene Tree for RPS27P5 (if available)
Gene Tree for RPS27P5 (if available)

No data available for Orthologs for RPS27P5 Gene

Paralogs for RPS27P5 Gene

No data available for Paralogs for RPS27P5 Gene

Variants for RPS27P5 Gene

Additional Variant Information for RPS27P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS27P5 Gene

Disorders for RPS27P5 Gene

No disorders were found for RPS27P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS27P5 Gene

Publications for RPS27P5 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for RPS27P5 Gene

Sources for RPS27P5 Gene

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