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Aliases for RPS27P3 Gene

Subcategory (RNA class) for RPS27P3 Gene

antisense

Aliases for RPS27P3 Gene

  • Ribosomal Protein S27 Pseudogene 3 2 3
  • RPS27_8_1194 3
  • AC005912.1 5

External Ids for RPS27P3 Gene

ORGUL Members for RPS27P3 Gene

Previous GeneCards Identifiers for RPS27P3 Gene

  • GC12U900535
  • GC12M003320

Summaries for RPS27P3 Gene

GeneCards Summary for RPS27P3 Gene

RPS27P3 (Ribosomal Protein S27 Pseudogene 3) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for RPS27P3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS27P3 Gene

Genomics for RPS27P3 Gene

Regulatory Elements for RPS27P3 Gene

Enhancers for RPS27P3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12H002256 1.2 ENCODE dbSUPER 19.5 +955.3 955253 1 ZNF133 GLI4 TCF12 ZNF121 ZNF302 ZNF416 ZNF202 YY2 ZNF488 ZFP41 ITFG2 TULP3 DCP1B CBX3P4 IQSEC3P1 RPS27P3 CACNA1C-IT3 CACNA1C-AS3 ITFG2-AS1 CACNA1C-AS4
GH12H003869 1.4 FANTOM5 ENCODE 10.6 -659.6 -659628 5 HDGF PKNOX1 ATF1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF121 GLIS2 PARP11 RPS27P3 TULP3 PIR51668
GH12H002876 1.1 ENCODE 10.7 +334.3 334279 3 PKNOX1 FOXA2 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF302 ZNF143 ZNF207 ITFG2 TULP3 DCP1B CBX3P4 RHNO1 ITFG2-AS1 NRIP2 RPS27P3 IQSEC3P1 FKBP4
GH12H003241 1.2 Ensembl ENCODE dbSUPER 6 -30.7 -30674 2 CTCF GATAD2A KLF1 KLF4 ZIC2 TEAD3 POLR2A GLIS1 KLF9 HNF4G RPS27P3 PIR53152 GC12P003266
GH12H003230 1 FANTOM5 ENCODE dbSUPER 6.1 -19.4 -19369 1 ZFHX2 KLF1 EGR2 RPS27P3 NRIP2 PIR53152 GC12P003266
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS27P3 on UCSC Golden Path with GeneCards custom track

Promoters for RPS27P3 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000047951 150 399

Genomic Location for RPS27P3 Gene

Chromosome:
12
Start:
3,211,606 bp from pter
End:
3,211,951 bp from pter
Size:
346 bases
Orientation:
Minus strand

Genomic View for RPS27P3 Gene

Genes around RPS27P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS27P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS27P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS27P3 Gene

Proteins for RPS27P3 Gene

Post-translational modifications for RPS27P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS27P3 Gene

Domains & Families for RPS27P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS27P3 Gene

Function for RPS27P3 Gene

Phenotypes From GWAS Catalog for RPS27P3 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS27P3
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS27P3 Gene

Localization for RPS27P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS27P3 Gene

Pathways & Interactions for RPS27P3 Gene

SuperPathways for RPS27P3 Gene

No Data Available

Interacting Proteins for RPS27P3 Gene

Gene Ontology (GO) - Biological Process for RPS27P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS27P3 Gene

Drugs & Compounds for RPS27P3 Gene

No Compound Related Data Available

Transcripts for RPS27P3 Gene

mRNA/cDNA for RPS27P3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS27P3
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPS27P3 Gene

No ASD Table

Relevant External Links for RPS27P3 Gene

GeneLoc Exon Structure for
RPS27P3
ECgene alternative splicing isoforms for
RPS27P3

Expression for RPS27P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS27P3 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS27P3 Gene:

RPS27P3
genes like me logo Genes that share expression patterns with RPS27P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS27P3 Gene

Orthologs for RPS27P3 Gene

Evolution for RPS27P3 Gene

ENSEMBL:
Gene Tree for RPS27P3 (if available)
TreeFam:
Gene Tree for RPS27P3 (if available)

No data available for Orthologs for RPS27P3 Gene

Paralogs for RPS27P3 Gene

No data available for Paralogs for RPS27P3 Gene

Variants for RPS27P3 Gene

Relevant External Links for RPS27P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS27P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS27P3 Gene

Disorders for RPS27P3 Gene

Relevant External Links for RPS27P3

Genetic Association Database (GAD)
RPS27P3

No disorders were found for RPS27P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS27P3 Gene

Publications for RPS27P3 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. A scan for positively selected genes in the genomes of humans and chimpanzees. (PMID: 15869325) Nielsen R … Cargill M (PLoS biology 2005) 3 60

Products for RPS27P3 Gene

Sources for RPS27P3 Gene

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