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Aliases for RPS27P26 Gene

Subcategory (RNA class) for RPS27P26 Gene

lncRNA

Aliases for RPS27P26 Gene

  • Ribosomal Protein S27 Pseudogene 26 2 3 5
  • Ribosomal Protein S27-Like Pseudogene 3
  • RPS27_12_1494 3

External Ids for RPS27P26 Gene

ORGUL Members for RPS27P26 Gene

Previous GeneCards Identifiers for RPS27P26 Gene

  • GC16U900946
  • GC16M070480
  • GC16M056310

Summaries for RPS27P26 Gene

GeneCards Summary for RPS27P26 Gene

RPS27P26 (Ribosomal Protein S27 Pseudogene 26) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS27P26 Gene

Genomics for RPS27P26 Gene

Regulatory Elements for RPS27P26 Gene

Enhancers for RPS27P26 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16F070414 1.7 FANTOM5 Ensembl ENCODE 13.1 +25.7 25657 10.3 HDGF PKNOX1 MLX ARNT CREB3L1 WRNIP1 ZFP64 ARID4B SIN3A DMAP1 COG4 RNU6-23P RPS27P26 LOC100506083 AARS DDX19B SMG1P7 PDXDC2P FUK WWP2
GH16F071426 1.1 ENCODE 16.2 -981.6 -981621 0.5 PKNOX1 MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 SLC30A9 ZNF302 DHX38 ZNF23 ENSG00000247324 SF3B3 AP1G1 ENSG00000262120 LOC102723796 LOC105371335 LOC102723786 ENSG00000261673
GH16F070444 0.5 ENCODE 0.8 +0.1 54 1.3 HLF RCOR2 ZIC2 SPI1 COG4 FUK RPS27P26 ST3GAL2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS27P26 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS27P26 Gene

Chromosome:
16
Start:
70,444,674 bp from pter
End:
70,444,912 bp from pter
Size:
239 bases
Orientation:
Minus strand

Genomic View for RPS27P26 Gene

Genes around RPS27P26 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS27P26 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS27P26 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS27P26 Gene

Proteins for RPS27P26 Gene

Post-translational modifications for RPS27P26 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS27P26 Gene

Domains & Families for RPS27P26 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS27P26 Gene

Function for RPS27P26 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS27P26 Gene

Localization for RPS27P26 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS27P26 Gene

Pathways & Interactions for RPS27P26 Gene

SuperPathways for RPS27P26 Gene

No Data Available

Interacting Proteins for RPS27P26 Gene

Gene Ontology (GO) - Biological Process for RPS27P26 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS27P26 Gene

Transcripts for RPS27P26 Gene

mRNA/cDNA for RPS27P26 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS27P26 Gene

No ASD Table

Relevant External Links for RPS27P26 Gene

GeneLoc Exon Structure for
RPS27P26
ECgene alternative splicing isoforms for
RPS27P26

Expression for RPS27P26 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS27P26 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS27P26 Gene:

RPS27P26
genes like me logo Genes that share expression patterns with RPS27P26: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS27P26 Gene

Orthologs for RPS27P26 Gene

Evolution for RPS27P26 Gene

ENSEMBL:
Gene Tree for RPS27P26 (if available)
TreeFam:
Gene Tree for RPS27P26 (if available)

No data available for Orthologs for RPS27P26 Gene

Paralogs for RPS27P26 Gene

No data available for Paralogs for RPS27P26 Gene

Variants for RPS27P26 Gene

Relevant External Links for RPS27P26 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS27P26

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS27P26 Gene

Disorders for RPS27P26 Gene

No disorders were found for RPS27P26 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS27P26 Gene

Publications for RPS27P26 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS27P26 Gene

Sources for RPS27P26 Gene

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