Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPS27P20 Gene

Aliases for RPS27P20 Gene

  • Ribosomal Protein S27 Pseudogene 20 2 3 5
  • RPS27_11_1188 3

External Ids for RPS27P20 Gene

Previous GeneCards Identifiers for RPS27P20 Gene

  • GC11U901276
  • GC11P129408

Summaries for RPS27P20 Gene

GeneCards Summary for RPS27P20 Gene

RPS27P20 (Ribosomal Protein S27 Pseudogene 20) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS27P20 Gene

Genomics for RPS27P20 Gene

Regulatory Elements for RPS27P20 Gene

Enhancers for RPS27P20 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G129530 0.7 ENCODE 0.4 -7.1 -7087 0.1 SOX13 CEBPG DMAP1 ZNF644 THRB ZNF48 RARA NCOR1 NR2F6 GATAD2A RPS27P20 GC11P129500
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS27P20 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS27P20 Gene

Chromosome:
11
Start:
129,537,837 bp from pter
End:
129,538,173 bp from pter
Size:
337 bases
Orientation:
Plus strand

Genomic View for RPS27P20 Gene

Genes around RPS27P20 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS27P20 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS27P20 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS27P20 Gene

Proteins for RPS27P20 Gene

Post-translational modifications for RPS27P20 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS27P20 Gene

Domains & Families for RPS27P20 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS27P20 Gene

Function for RPS27P20 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS27P20 Gene

Localization for RPS27P20 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS27P20 Gene

Pathways & Interactions for RPS27P20 Gene

SuperPathways for RPS27P20 Gene

No Data Available

Interacting Proteins for RPS27P20 Gene

Gene Ontology (GO) - Biological Process for RPS27P20 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS27P20 Gene

Drugs & Compounds for RPS27P20 Gene

No Compound Related Data Available

Transcripts for RPS27P20 Gene

mRNA/cDNA for RPS27P20 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS27P20 Gene

No ASD Table

Relevant External Links for RPS27P20 Gene

GeneLoc Exon Structure for
RPS27P20
ECgene alternative splicing isoforms for
RPS27P20

Expression for RPS27P20 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS27P20 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS27P20 Gene:

RPS27P20
genes like me logo Genes that share expression patterns with RPS27P20: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS27P20 Gene

Orthologs for RPS27P20 Gene

Evolution for RPS27P20 Gene

ENSEMBL:
Gene Tree for RPS27P20 (if available)
TreeFam:
Gene Tree for RPS27P20 (if available)

No data available for Orthologs for RPS27P20 Gene

Paralogs for RPS27P20 Gene

No data available for Paralogs for RPS27P20 Gene

Variants for RPS27P20 Gene

Relevant External Links for RPS27P20 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS27P20

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS27P20 Gene

Disorders for RPS27P20 Gene

Relevant External Links for RPS27P20

Genetic Association Database (GAD)
RPS27P20

No disorders were found for RPS27P20 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS27P20 Gene

Publications for RPS27P20 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. A genome-wide association search for type 2 diabetes genes in African Americans. (PMID: 22238593) Palmer N.D. … Sladek R. (PLoS ONE 2012) 46 64

Products for RPS27P20 Gene

Sources for RPS27P20 Gene

Content
Loading form....