Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPS27P19 Gene

Aliases for RPS27P19 Gene

  • Ribosomal Protein S27 Pseudogene 19 2 3
  • RPS27_7_1180 3
  • AP000936.1 5

External Ids for RPS27P19 Gene

Previous GeneCards Identifiers for RPS27P19 Gene

  • GC11M116413
  • GC11M116907

Summaries for RPS27P19 Gene

GeneCards Summary for RPS27P19 Gene

RPS27P19 (Ribosomal Protein S27 Pseudogene 19) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS27P19 Gene

Genomics for RPS27P19 Gene

Regulatory Elements for RPS27P19 Gene

Enhancers for RPS27P19 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F117019 0.6 Ensembl ENCODE 11.5 +12.4 12446 8.5 HDGF PKNOX1 MLX WRNIP1 ARID4B FEZF1 ZNF2 YY1 ZNF121 ZNF143 LOC653303 BUD13 RNF214 ZPR1 APOA1 RPS27P19 SIK3 ENSG00000224077 RNY4P6 GC11M117036
GH11F117081 0.2 Ensembl 11.4 -45.2 -45216 0.2 ZNF202 ZNF680 ZNF654 ZFP64 ZBTB11 ZNF140 ZBTB8A REST ZNF623 ZNF518A BUD13 RNF214 ZPR1 APOA1 RPS27P19 LOC653303 GC11M117070 SIK3
GH11F117009 0.9 Ensembl ENCODE 10 +24.8 24849 2.5 INSM2 GTF3C2 ZNF121 ZNF366 FOS EGR2 ZNF280D ZEB2 TSHZ1 ZFP69B LOC653303 BUD13 RNF214 APOA1 RPS27P19 GC11P117017
GH11F117327 1 ENCODE 9.7 -292.1 -292133 2.2 HDGF PKNOX1 CREB3L1 ARID4B SIN3A ZNF207 ZNF143 FOS SP3 SP5 RNF214 BUD13 PCSK7 ENSG00000252992 RPS27P19 BACE1 ENSG00000250699 GC11M117336
GH11F117906 0.9 Ensembl ENCODE 9.7 -872.8 -872801 4.1 HDGF PKNOX1 ATF1 ZNF133 GTF3C2 GATA2 FOS ZNF263 SP3 GTF2B ARCN1 UBE4A TMPRSS13 FXYD6 FXYD6-FXYD2 DSCAML1 ENSG00000254844 RNF214 ENSG00000254528 FXYD2
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPS27P19 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS27P19 Gene

Chromosome:
11
Start:
117,035,740 bp from pter
End:
117,036,085 bp from pter
Size:
346 bases
Orientation:
Minus strand

Genomic View for RPS27P19 Gene

Genes around RPS27P19 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS27P19 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS27P19 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS27P19 Gene

Proteins for RPS27P19 Gene

Post-translational modifications for RPS27P19 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS27P19 Gene

Domains & Families for RPS27P19 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS27P19 Gene

Function for RPS27P19 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS27P19 Gene

Localization for RPS27P19 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS27P19 Gene

Pathways & Interactions for RPS27P19 Gene

SuperPathways for RPS27P19 Gene

No Data Available

Interacting Proteins for RPS27P19 Gene

Gene Ontology (GO) - Biological Process for RPS27P19 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS27P19 Gene

Transcripts for RPS27P19 Gene

mRNA/cDNA for RPS27P19 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS27P19 Gene

No ASD Table

Relevant External Links for RPS27P19 Gene

GeneLoc Exon Structure for
RPS27P19
ECgene alternative splicing isoforms for
RPS27P19

Expression for RPS27P19 Gene

mRNA expression in normal human tissues for RPS27P19 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS27P19 Gene:

RPS27P19
genes like me logo Genes that share expression patterns with RPS27P19: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS27P19 Gene

Orthologs for RPS27P19 Gene

Evolution for RPS27P19 Gene

ENSEMBL:
Gene Tree for RPS27P19 (if available)
TreeFam:
Gene Tree for RPS27P19 (if available)

No data available for Orthologs for RPS27P19 Gene

Paralogs for RPS27P19 Gene

No data available for Paralogs for RPS27P19 Gene

Variants for RPS27P19 Gene

Relevant External Links for RPS27P19 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS27P19

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS27P19 Gene

Disorders for RPS27P19 Gene

Relevant External Links for RPS27P19

Genetic Association Database (GAD)
RPS27P19

No disorders were found for RPS27P19 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS27P19 Gene

Publications for RPS27P19 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association study of coronary heart disease and its risk factors in 8,090 African Americans: the NHLBI CARe Project. (PMID: 21347282) Lettre G. … Boerwinkle E. (PLoS Genet. 2011) 46 64

Products for RPS27P19 Gene

Sources for RPS27P19 Gene

Content
Loading form....