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Aliases for RPS27P19 Gene

Aliases for RPS27P19 Gene

  • Ribosomal Protein S27 Pseudogene 19 2 3
  • RPS27_7_1180 3
  • AP000936.3 5

External Ids for RPS27P19 Gene

Previous GeneCards Identifiers for RPS27P19 Gene

  • GC11M116413
  • GC11M116907

Summaries for RPS27P19 Gene

GeneCards Summary for RPS27P19 Gene

RPS27P19 (Ribosomal Protein S27 Pseudogene 19) is a Pseudogene.

Additional gene information for RPS27P19 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS27P19 Gene

Genomics for RPS27P19 Gene

Regulatory Elements for RPS27P19 Gene

Enhancers for RPS27P19 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11H117997 2 FANTOM5 Ensembl ENCODE dbSUPER 9.7 -970.0 -969981 17 HDGF PKNOX1 ARNT YBX1 ZNF766 ZNF143 ZNF207 FOS MCM5 JUNB IL10RA ENSG00000254528 ARCN1 RNF214 KMT2A ENSG00000254909 UBE4A RPL5P30 FXYD2 TMPRSS13
GH11H117809 1.8 FANTOM5 Ensembl ENCODE dbSUPER 10.5 -773.5 -773543 0 HDGF ARNT YBX1 ZNF2 ZBTB7B ZNF207 NCOA1 REST SNIP1 MEF2D UBE4A ARCN1 DSCAML1 KMT2A SIDT2 FXYD2 MPZL2 RNF214 RPS27P19 DDX6
GH11H117906 1.5 Ensembl ENCODE dbSUPER 9.7 -872.8 -872801 4 HDGF PKNOX1 ATF1 ARNT ZNF133 TCF12 GTF3C2 GATA2 FOS ATF7 ARCN1 UBE4A TMPRSS13 FXYD6 FXYD6-FXYD2 DSCAML1 ENSG00000254844 RNF214 ENSG00000254528 FXYD2
GH11H117009 1.3 Ensembl ENCODE dbSUPER 10 +24.8 24849 2 JUN INSM2 HIC1 GTF3C2 ZNF121 ZFHX2 ZNF316 ZBTB48 ZNF366 FOS LOC653303 BUD13 RNF214 APOA1 RPS27P19 GC11P117017
GH11H117327 1.1 ENCODE 9.7 -292.1 -292133 2 HDGF PKNOX1 ARNT ARID4B SIN3A ZBTB7B YY1 ZNF766 ZNF207 ZNF143 RNF214 BUD13 ZPR1 PCSK7 ENSG00000252992 RPS27P19 BACE1 ENSG00000250699 GC11M117336
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS27P19 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS27P19 Gene

Chromosome:
11
Start:
117,035,740 bp from pter
End:
117,036,085 bp from pter
Size:
346 bases
Orientation:
Minus strand

Genomic View for RPS27P19 Gene

Genes around RPS27P19 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS27P19 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS27P19 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS27P19 Gene

Proteins for RPS27P19 Gene

Post-translational modifications for RPS27P19 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS27P19 Gene

Domains & Families for RPS27P19 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS27P19 Gene

Function for RPS27P19 Gene

Phenotypes From GWAS Catalog for RPS27P19 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS27P19
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS27P19 Gene

Localization for RPS27P19 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS27P19 Gene

Pathways & Interactions for RPS27P19 Gene

SuperPathways for RPS27P19 Gene

No Data Available

Interacting Proteins for RPS27P19 Gene

Gene Ontology (GO) - Biological Process for RPS27P19 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS27P19 Gene

Drugs & Compounds for RPS27P19 Gene

No Compound Related Data Available

Transcripts for RPS27P19 Gene

mRNA/cDNA for RPS27P19 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS27P19
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPS27P19 Gene

No ASD Table

Relevant External Links for RPS27P19 Gene

GeneLoc Exon Structure for
RPS27P19
ECgene alternative splicing isoforms for
RPS27P19

Expression for RPS27P19 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS27P19 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS27P19 Gene:

RPS27P19
genes like me logo Genes that share expression patterns with RPS27P19: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS27P19 Gene

Orthologs for RPS27P19 Gene

Evolution for RPS27P19 Gene

ENSEMBL:
Gene Tree for RPS27P19 (if available)
TreeFam:
Gene Tree for RPS27P19 (if available)

No data available for Orthologs for RPS27P19 Gene

Paralogs for RPS27P19 Gene

No data available for Paralogs for RPS27P19 Gene

Variants for RPS27P19 Gene

Relevant External Links for RPS27P19 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS27P19

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS27P19 Gene

Disorders for RPS27P19 Gene

Relevant External Links for RPS27P19

Genetic Association Database (GAD)
RPS27P19

No disorders were found for RPS27P19 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS27P19 Gene

Publications for RPS27P19 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. Genome-wide association study of coronary heart disease and its risk factors in 8,090 African Americans: the NHLBI CARe Project. (PMID: 21347282) Lettre G … Boerwinkle E (PLoS genetics 2011) 45 60

Products for RPS27P19 Gene

Sources for RPS27P19 Gene

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