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Aliases for RPS27P17 Gene

Aliases for RPS27P17 Gene

  • Ribosomal Protein S27 Pseudogene 17 2 3
  • RPS27_5_819 3
  • AC002075.4 5

External Ids for RPS27P17 Gene

Previous GeneCards Identifiers for RPS27P17 Gene

  • GC07M093136
  • GC07M093300

Summaries for RPS27P17 Gene

GeneCards Summary for RPS27P17 Gene

RPS27P17 (Ribosomal Protein S27 Pseudogene 17) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS27P17 Gene

Genomics for RPS27P17 Gene

Regulatory Elements for RPS27P17 Gene

Enhancers for RPS27P17 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F094373 1.3 Ensembl ENCODE 11.6 -705.9 -705905 5.3 CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF766 ZNF143 KLF13 ZNF263 RPS3AP25 RPS27P17 LOC105375403 CASD1 GC07P094390 GC07P094145
GH07F094003 1.1 ENCODE 11.6 -334.1 -334066 1.9 CREB3L1 ARID4B SIN3A DMAP1 YY1 ZNF143 SP3 NFYC ZHX2 REST RPS3AP25 RPS27P17 GNG11 LOC105375403 BET1
GH07F093231 1.1 ENCODE 11.6 +438.0 438040 2.0 PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A ZNF2 YY1 ZNF207 ZNF143 SAMD9L LOC105375403 FAM133B GATAD1 RPS27P17 VPS50 HEPACAM2
GH07F093623 0.9 Ensembl ENCODE 0.2 +47.3 47349 0.7 CTCF ATF1 ZNF654 RFX1 TEAD2 RAD21 GATA3 CTBP1 GLIS1 SMC3 GNGT1 RPS27P17
GH07F093601 0.6 FANTOM5 0.2 +68.0 68032 0.2 POLR2H ZNF318 RNF2 CEBPB VPS50 GNGT1 RPS27P17
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS27P17 on UCSC Golden Path with GeneCards custom track

Promoters for RPS27P17 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001894091 110 399

Genomic Location for RPS27P17 Gene

93,669,769 bp from pter
93,670,111 bp from pter
343 bases
Minus strand

Genomic View for RPS27P17 Gene

Genes around RPS27P17 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS27P17 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS27P17 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS27P17 Gene

Proteins for RPS27P17 Gene

Post-translational modifications for RPS27P17 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS27P17 Gene

Domains & Families for RPS27P17 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS27P17 Gene

Function for RPS27P17 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS27P17 Gene

Localization for RPS27P17 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS27P17 Gene

Pathways & Interactions for RPS27P17 Gene

SuperPathways for RPS27P17 Gene

No Data Available

Interacting Proteins for RPS27P17 Gene

Gene Ontology (GO) - Biological Process for RPS27P17 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPS27P17 Gene

Transcripts for RPS27P17 Gene

mRNA/cDNA for RPS27P17 Gene

(7) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS27P17 Gene

No ASD Table

Relevant External Links for RPS27P17 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPS27P17 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS27P17 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS27P17 Gene:

genes like me logo Genes that share expression patterns with RPS27P17: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS27P17 Gene

Orthologs for RPS27P17 Gene

Evolution for RPS27P17 Gene

Gene Tree for RPS27P17 (if available)
Gene Tree for RPS27P17 (if available)

No data available for Orthologs for RPS27P17 Gene

Paralogs for RPS27P17 Gene

No data available for Paralogs for RPS27P17 Gene

Variants for RPS27P17 Gene

Relevant External Links for RPS27P17 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS27P17 Gene

Disorders for RPS27P17 Gene

Relevant External Links for RPS27P17

Genetic Association Database (GAD)

No disorders were found for RPS27P17 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS27P17 Gene

Publications for RPS27P17 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan R.S. … Benjamin E.J. (BMC Med. Genet. 2007) 46 64

Products for RPS27P17 Gene

Sources for RPS27P17 Gene

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