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Aliases for RPS27AP9 Gene

Aliases for RPS27AP9 Gene

  • Ribosomal Protein S27a Pseudogene 9 2 3 5
  • RPS27A_3_585 3

External Ids for RPS27AP9 Gene

Previous GeneCards Identifiers for RPS27AP9 Gene

  • GC05U901065
  • GC05M079795

Summaries for RPS27AP9 Gene

GeneCards Summary for RPS27AP9 Gene

RPS27AP9 (Ribosomal Protein S27a Pseudogene 9) is a Pseudogene.

Additional gene information for RPS27AP9 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS27AP9 Gene

Genomics for RPS27AP9 Gene

Regulatory Elements for RPS27AP9 Gene

Enhancers for RPS27AP9 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05H080487 1.1 ENCODE 0.4 +10.0 10018 3 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 SP3 MXD4 NFYC REST ZCCHC9 CKMT2-AS1 MTX3 ZFYVE16 DHFR LOC105379049 RPS27AP9
GH05H080492 1 Ensembl ENCODE 0.4 +5.3 5279 2 PKNOX1 NFIB MTA3 CTBP1 GATA3 ZNF366 RCOR1 TCF7L2 SMARCE1 HCFC1 RNU6-211P ZFYVE16 RPS27AP9 LOC105379049
GH05H080491 0.4 ENCODE 0.4 +7.4 7409 0 SP5 LOC105379049 RPS27AP9
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS27AP9 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS27AP9 Gene

Chromosome:
5
Start:
80,498,530 bp from pter
End:
80,498,972 bp from pter
Size:
443 bases
Orientation:
Minus strand

Genomic View for RPS27AP9 Gene

Genes around RPS27AP9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS27AP9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS27AP9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS27AP9 Gene

Proteins for RPS27AP9 Gene

Post-translational modifications for RPS27AP9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS27AP9 Gene

Domains & Families for RPS27AP9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS27AP9 Gene

Function for RPS27AP9 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS27AP9
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS27AP9 Gene

Localization for RPS27AP9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS27AP9 Gene

Pathways & Interactions for RPS27AP9 Gene

SuperPathways for RPS27AP9 Gene

No Data Available

Interacting Proteins for RPS27AP9 Gene

Gene Ontology (GO) - Biological Process for RPS27AP9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS27AP9 Gene

Drugs & Compounds for RPS27AP9 Gene

No Compound Related Data Available

Transcripts for RPS27AP9 Gene

mRNA/cDNA for RPS27AP9 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS27AP9
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPS27AP9 Gene

No ASD Table

Relevant External Links for RPS27AP9 Gene

GeneLoc Exon Structure for
RPS27AP9
ECgene alternative splicing isoforms for
RPS27AP9

Expression for RPS27AP9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS27AP9 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS27AP9 Gene:

RPS27AP9
genes like me logo Genes that share expression patterns with RPS27AP9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS27AP9 Gene

Orthologs for RPS27AP9 Gene

Evolution for RPS27AP9 Gene

ENSEMBL:
Gene Tree for RPS27AP9 (if available)
TreeFam:
Gene Tree for RPS27AP9 (if available)

No data available for Orthologs for RPS27AP9 Gene

Paralogs for RPS27AP9 Gene

No data available for Paralogs for RPS27AP9 Gene

Variants for RPS27AP9 Gene

Relevant External Links for RPS27AP9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS27AP9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS27AP9 Gene

Disorders for RPS27AP9 Gene

No disorders were found for RPS27AP9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS27AP9 Gene

Publications for RPS27AP9 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPS27AP9 Gene

Sources for RPS27AP9 Gene

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