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Aliases for RPS27AP8 Gene

Subcategory (RNA class) for RPS27AP8 Gene

antisense

Aliases for RPS27AP8 Gene

  • Ribosomal Protein S27a Pseudogene 8 2 3 5
  • RPS27A_2_437 3

External Ids for RPS27AP8 Gene

ORGUL Members for RPS27AP8 Gene

Previous GeneCards Identifiers for RPS27AP8 Gene

  • GC03U901235
  • GC03M171944

Summaries for RPS27AP8 Gene

GeneCards Summary for RPS27AP8 Gene

RPS27AP8 (Ribosomal Protein S27a Pseudogene 8) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for RPS27AP8 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS27AP8 Gene

Genomics for RPS27AP8 Gene

Regulatory Elements for RPS27AP8 Gene

Enhancers for RPS27AP8 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H172221 1.1 Ensembl ENCODE dbSUPER 0.7 +3.9 3943 1 PAF1 HLF CEBPB REST ZIC2 JUND SSRP1 POLR2A FOS ZNF600 RPS27AP8 FNDC3B
GH03H172216 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +7.6 7627 3 GTF2F1 ZNF146 FEZF1 ZNF384 RAD21 ZNF7 RFX5 GATA3 POLR2A EED FNDC3B PLD1 RPS27AP8
GH03H172224 0.9 Ensembl dbSUPER 0.7 +1.1 1072 0 L3MBTL2 FEZF1 NFIL3 PRDM6 HNF1A NR2F6 TRIM28 TCF7L2 FNDC3B RPS27AP8
GH03H172208 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +15.8 15766 3 PAF1 ZFHX2 PRDM6 IKZF1 ZNF10 ATF7 IKZF2 ZKSCAN1 FNDC3B PLD1 RPS27AP8
GH03H172212 1.3 Ensembl ENCODE dbSUPER 0.4 +12.4 12360 2 TBL1XR1 SIN3A FEZF1 EBF1 FOSL1 ZNF766 GATA3 ZSCAN5C SCRT2 ATF7 FNDC3B RPS27AP8
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS27AP8 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS27AP8 Gene

Chromosome:
3
Start:
172,225,428 bp from pter
End:
172,225,872 bp from pter
Size:
445 bases
Orientation:
Minus strand

Genomic View for RPS27AP8 Gene

Genes around RPS27AP8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS27AP8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS27AP8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS27AP8 Gene

Proteins for RPS27AP8 Gene

Post-translational modifications for RPS27AP8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS27AP8 Gene

Domains & Families for RPS27AP8 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS27AP8 Gene

Function for RPS27AP8 Gene

Phenotypes From GWAS Catalog for RPS27AP8 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS27AP8
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS27AP8 Gene

Localization for RPS27AP8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS27AP8 Gene

Pathways & Interactions for RPS27AP8 Gene

SuperPathways for RPS27AP8 Gene

No Data Available

Interacting Proteins for RPS27AP8 Gene

Gene Ontology (GO) - Biological Process for RPS27AP8 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS27AP8 Gene

Drugs & Compounds for RPS27AP8 Gene

No Compound Related Data Available

Transcripts for RPS27AP8 Gene

mRNA/cDNA for RPS27AP8 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS27AP8
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPS27AP8 Gene

No ASD Table

Relevant External Links for RPS27AP8 Gene

GeneLoc Exon Structure for
RPS27AP8
ECgene alternative splicing isoforms for
RPS27AP8

Expression for RPS27AP8 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS27AP8 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS27AP8 Gene:

RPS27AP8
genes like me logo Genes that share expression patterns with RPS27AP8: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS27AP8 Gene

Orthologs for RPS27AP8 Gene

Evolution for RPS27AP8 Gene

ENSEMBL:
Gene Tree for RPS27AP8 (if available)
TreeFam:
Gene Tree for RPS27AP8 (if available)

No data available for Orthologs for RPS27AP8 Gene

Paralogs for RPS27AP8 Gene

No data available for Paralogs for RPS27AP8 Gene

Variants for RPS27AP8 Gene

Relevant External Links for RPS27AP8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS27AP8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS27AP8 Gene

Disorders for RPS27AP8 Gene

No disorders were found for RPS27AP8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS27AP8 Gene

Publications for RPS27AP8 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPS27AP8 Gene

Sources for RPS27AP8 Gene

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