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Aliases for RPS27AP5 Gene

Aliases for RPS27AP5 Gene

  • Ribosomal Protein S27a Pseudogene 5 2 3
  • RPS27A_1_141 3

External Ids for RPS27AP5 Gene

Previous GeneCards Identifiers for RPS27AP5 Gene

  • GC01U902272

Summaries for RPS27AP5 Gene

GeneCards Summary for RPS27AP5 Gene

RPS27AP5 (Ribosomal Protein S27a Pseudogene 5) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS27AP5 Gene

Genomics for RPS27AP5 Gene

Regulatory Elements for RPS27AP5 Gene

Enhancers for RPS27AP5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F192699 1.2 Ensembl ENCODE 0.4 -14.6 -14638 3.6 PKNOX1 ATF1 ARID4B FOS PPARG KAT8 ETV4 RCOR2 STAT3 SP7 RGS13 RGS2 RPS27AP5
GH01F192639 1.4 FANTOM5 Ensembl ENCODE 0.2 -76.0 -76037 2.0 CTCF USF1 PKNOX1 BMI1 RAD21 RELA POLR2A ZNF366 EED ZNF207 RGS13 RGS1 RGS2 RPS27AP5
GH01F192707 0.4 Ensembl 0.4 -8.2 -8235 0.2 HLF FOXA3 RPS27AP5 RGS13
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS27AP5 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS27AP5 Gene

Chromosome:
1
Start:
192,716,135 bp from pter
End:
192,716,683 bp from pter
Size:
549 bases
Orientation:
Plus strand

Genomic View for RPS27AP5 Gene

Genes around RPS27AP5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS27AP5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS27AP5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS27AP5 Gene

Proteins for RPS27AP5 Gene

Post-translational modifications for RPS27AP5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS27AP5 Gene

Domains & Families for RPS27AP5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS27AP5 Gene

Function for RPS27AP5 Gene

Phenotypes for RPS27AP5 Gene

GenomeRNAi human phenotypes for RPS27AP5:
genes like me logo Genes that share phenotypes with RPS27AP5: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS27AP5 Gene

Localization for RPS27AP5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS27AP5 Gene

Pathways & Interactions for RPS27AP5 Gene

SuperPathways for RPS27AP5 Gene

No Data Available

Interacting Proteins for RPS27AP5 Gene

Gene Ontology (GO) - Biological Process for RPS27AP5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS27AP5 Gene

Transcripts for RPS27AP5 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RPS27AP5 Gene

No ASD Table

Relevant External Links for RPS27AP5 Gene

GeneLoc Exon Structure for
RPS27AP5
ECgene alternative splicing isoforms for
RPS27AP5

No data available for mRNA/cDNA for RPS27AP5 Gene

Expression for RPS27AP5 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS27AP5 Gene:

RPS27AP5
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS27AP5 Gene

Orthologs for RPS27AP5 Gene

No data available for Orthologs and Evolution for RPS27AP5 Gene

Paralogs for RPS27AP5 Gene

No data available for Paralogs for RPS27AP5 Gene

Variants for RPS27AP5 Gene

Relevant External Links for RPS27AP5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS27AP5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS27AP5 Gene

Disorders for RPS27AP5 Gene

Relevant External Links for RPS27AP5

Genetic Association Database (GAD)
RPS27AP5

No disorders were found for RPS27AP5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS27AP5 Gene

Publications for RPS27AP5 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S. … Cupples L.A. (BMC Med. Genet. 2007) 46 64

Products for RPS27AP5 Gene

Sources for RPS27AP5 Gene

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