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Aliases for RPS27AP11 Gene

Aliases for RPS27AP11 Gene

  • Ribosomal Protein S27a Pseudogene 11 2 3 5
  • RPS27A_4_740 3

External Ids for RPS27AP11 Gene

Previous GeneCards Identifiers for RPS27AP11 Gene

  • GC06P114012
  • GC06P113903

Summaries for RPS27AP11 Gene

GeneCards Summary for RPS27AP11 Gene

RPS27AP11 (Ribosomal Protein S27a Pseudogene 11) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS27AP11 Gene

Genomics for RPS27AP11 Gene

Regulatory Elements for RPS27AP11 Gene

Enhancers for RPS27AP11 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F113646 1.4 Ensembl ENCODE 29.8 +67.4 67409 4.3 HDGF PKNOX1 MLX ARNT CREB3L1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 RPS27AP11 HDAC2 FLJ34503 LOC101927686 GC06P113618
GH06F113854 2.5 FANTOM5 ENCODE 10.5 +276.4 276358 7.5 HDGF PKNOX1 WRNIP1 ARID4B SIN3A YBX1 FEZF1 DMAP1 ZNF2 ZNF143 FLJ34503 RPS27AP11 MARCKS GC06P113861
GH06F113968 1.2 ENCODE 21.1 +389.1 389129 3.2 HDGF ARNT CREB3L1 MLX WRNIP1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 HDAC2 RPS27AP11 ENSG00000231912 ENSG00000232395 ENSG00000226079 ENSG00000223811 SOCS5P5 FLJ34503 LOC101927768
GH06F113629 1.4 FANTOM5 ENCODE 11.4 +51.2 51219 6.6 HDGF PKNOX1 WRNIP1 SIN3A ZNF207 FOS JUNB TSHZ1 TBX21 PPARG HDAC2 LOC101927686 MARCKS RPS27AP11 GC06P113618
GH06F113495 1.1 Ensembl ENCODE 12.3 -85.5 -85458 2.3 ZFP64 RAD21 ZEB1 FOS ZNF202 ZBTB11 ZEB2 TSHZ1 ZNF623 ZNF781 HDAC2 RPS27AP11 GC06P113526 LOC105377957
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS27AP11 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS27AP11 Gene

Chromosome:
6
Start:
113,581,463 bp from pter
End:
113,581,999 bp from pter
Size:
537 bases
Orientation:
Plus strand

Genomic View for RPS27AP11 Gene

Genes around RPS27AP11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS27AP11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS27AP11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS27AP11 Gene

Proteins for RPS27AP11 Gene

Post-translational modifications for RPS27AP11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS27AP11 Gene

Domains & Families for RPS27AP11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS27AP11 Gene

Function for RPS27AP11 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS27AP11 Gene

Localization for RPS27AP11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS27AP11 Gene

Pathways & Interactions for RPS27AP11 Gene

SuperPathways for RPS27AP11 Gene

No Data Available

Interacting Proteins for RPS27AP11 Gene

Gene Ontology (GO) - Biological Process for RPS27AP11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS27AP11 Gene

Transcripts for RPS27AP11 Gene

mRNA/cDNA for RPS27AP11 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS27AP11 Gene

No ASD Table

Relevant External Links for RPS27AP11 Gene

GeneLoc Exon Structure for
RPS27AP11
ECgene alternative splicing isoforms for
RPS27AP11

Expression for RPS27AP11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS27AP11 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS27AP11 Gene:

RPS27AP11
genes like me logo Genes that share expression patterns with RPS27AP11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS27AP11 Gene

Orthologs for RPS27AP11 Gene

Evolution for RPS27AP11 Gene

ENSEMBL:
Gene Tree for RPS27AP11 (if available)
TreeFam:
Gene Tree for RPS27AP11 (if available)

No data available for Orthologs for RPS27AP11 Gene

Paralogs for RPS27AP11 Gene

No data available for Paralogs for RPS27AP11 Gene

Variants for RPS27AP11 Gene

Relevant External Links for RPS27AP11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS27AP11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS27AP11 Gene

Disorders for RPS27AP11 Gene

Relevant External Links for RPS27AP11

Genetic Association Database (GAD)
RPS27AP11

No disorders were found for RPS27AP11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS27AP11 Gene

Publications for RPS27AP11 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan R.S. … Benjamin E.J. (BMC Med. Genet. 2007) 46 64

Products for RPS27AP11 Gene

Sources for RPS27AP11 Gene

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