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Aliases for RPS27AP10 Gene

Aliases for RPS27AP10 Gene

  • Ribosomal Protein S27a Pseudogene 10 2 3 5
  • RPS27A_3_621 3

External Ids for RPS27AP10 Gene

Previous GeneCards Identifiers for RPS27AP10 Gene

  • GC05U901125
  • GC05P141065
  • GC05P141078
  • GC05P141092
  • GC05P141126
  • GC05P141159
  • GC05P141191
  • GC05P141224
  • GC05P141265
  • GC05P141342
  • GC05P141398

Summaries for RPS27AP10 Gene

GeneCards Summary for RPS27AP10 Gene

RPS27AP10 (Ribosomal Protein S27a Pseudogene 10) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS27AP10 Gene

Genomics for RPS27AP10 Gene

Regulatory Elements for RPS27AP10 Gene

Enhancers for RPS27AP10 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05F141592 0.6 Ensembl ENCODE 0.8 +3.4 3366 0.6 CTCF SAP130 ARID4B RAD21 ZNF121 ZNF664 NCOR1 GATAD1 ZNF143 SMC3 FCHSD1 LOC102723915 DIAPH1 RELL2 HDAC3 PCDHGA1 GC05P141898 RPS27AP10
GH05F141589 1.3 Ensembl ENCODE 0.8 +1.4 1443 1.3 ELF3 MLX RAD21 RARA YY1 CREM MIXL1 THAP11 CEBPB PPARG LOC102723915 DIAPH1 HDAC3 RELL2 FCHSD1 LOC100505658 GC05P141898 RPS27AP10
GH05F141597 1.8 FANTOM5 Ensembl ENCODE 0.4 +15.0 14966 13.8 PKNOX1 ARNT ARID4B SIN3A YY1 CBX5 ZNF143 ZNF263 JUNB TBX21 RELL2 HDAC3 FCHSD1 DIAPH1 LOC100505658 PCDHGA6 PCDHGB6 KIAA0141 PCDHGA8 PCDHB17P
GH05F141563 1.2 Ensembl ENCODE 0.3 -24.5 -24523 1.4 PKNOX1 ATF1 ARNT SIN3A DMAP1 BRCA1 ZNF2 YY1 CBX5 ZNF143 PCDHGB4 PCDHB11 PCDHB13 PCDHGB3 PCDHB12 PCDHB7 PCDHGB6 PCDHGA7 PCDHB18P PCDHGA8
GH05F141557 0.5 ENCODE 0.3 -29.4 -29431 4.7 ATF1 CBX3 PKNOX1 SIN3A RAD21 CHAMP1 YY1 ZNF207 RCOR1 FOS PCDHGA6 PCDHB18P PCDHA2 PCDHGA7 PCDHA3 PCDHA7 RELL2 DIAPH1 FCHSD1 LOC100505658
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPS27AP10 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS27AP10 Gene

Chromosome:
5
Start:
141,588,935 bp from pter
End:
141,589,396 bp from pter
Size:
462 bases
Orientation:
Plus strand

Genomic View for RPS27AP10 Gene

Genes around RPS27AP10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS27AP10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS27AP10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS27AP10 Gene

Proteins for RPS27AP10 Gene

Post-translational modifications for RPS27AP10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS27AP10 Gene

Domains & Families for RPS27AP10 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS27AP10 Gene

Function for RPS27AP10 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS27AP10 Gene

Localization for RPS27AP10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS27AP10 Gene

Pathways & Interactions for RPS27AP10 Gene

SuperPathways for RPS27AP10 Gene

No Data Available

Interacting Proteins for RPS27AP10 Gene

Gene Ontology (GO) - Biological Process for RPS27AP10 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS27AP10 Gene

Transcripts for RPS27AP10 Gene

mRNA/cDNA for RPS27AP10 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS27AP10 Gene

No ASD Table

Relevant External Links for RPS27AP10 Gene

GeneLoc Exon Structure for
RPS27AP10
ECgene alternative splicing isoforms for
RPS27AP10

Expression for RPS27AP10 Gene

mRNA expression in normal human tissues for RPS27AP10 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS27AP10 Gene:

RPS27AP10
genes like me logo Genes that share expression patterns with RPS27AP10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS27AP10 Gene

Orthologs for RPS27AP10 Gene

Evolution for RPS27AP10 Gene

ENSEMBL:
Gene Tree for RPS27AP10 (if available)
TreeFam:
Gene Tree for RPS27AP10 (if available)

No data available for Orthologs for RPS27AP10 Gene

Paralogs for RPS27AP10 Gene

No data available for Paralogs for RPS27AP10 Gene

Variants for RPS27AP10 Gene

Relevant External Links for RPS27AP10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS27AP10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS27AP10 Gene

Disorders for RPS27AP10 Gene

No disorders were found for RPS27AP10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS27AP10 Gene

Publications for RPS27AP10 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS27AP10 Gene

Sources for RPS27AP10 Gene

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