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Aliases for RPS26P57 Gene

Subcategory (RNA class) for RPS26P57 Gene

lncRNA

Aliases for RPS26P57 Gene

  • Ribosomal Protein S26 Pseudogene 57 2 3
  • RPS26_34_1808 3
  • Z85995.1 5

External Ids for RPS26P57 Gene

ORGUL Members for RPS26P57 Gene

Previous GeneCards Identifiers for RPS26P57 Gene

  • GC0XU901259
  • GC0XM123823

Summaries for RPS26P57 Gene

GeneCards Summary for RPS26P57 Gene

RPS26P57 (Ribosomal Protein S26 Pseudogene 57) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPS26P57 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS26P57 Gene

Genomics for RPS26P57 Gene

GeneHancer (GH) Regulatory Elements for RPS26P57 Gene

Promoters and enhancers for RPS26P57 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI124642 Enhancer 0.7 ENCODE 0.2 +46.6 46592 0.2 BACH1 ZNF316 EGR1 NFE2 MAFK ZNF639 SMARCE1 ZBTB11 MAFG CEBPB RPS26P57 LOC105373331 TENM1
GH0XI124734 Enhancer 0.7 ENCODE 0.2 -47.6 -47575 3.9 MEIS2 PKNOX1 USF1 ZFP64 ZNF140 ZNF266 ZNF697 ZNF664 ZNF213 POLR2A LOC101928402 RPS26P57 GC0XM125062 TENM1
GH0XI124406 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.1 +282.0 281952 0.2 MEIS2 CTCF PKNOX1 ZNF654 RB1 REST ZNF2 RAD21 FOSL1 ARID2 LOC105373331 RPS26P57 STAG2 TENM1
GH0XI124593 Enhancer 0.5 ENCODE 0.2 +94.6 94630 1.2 JUND HNF4G HNF4A ATF7 ATF2 TENM1 RPS26P57 LOC105373331
GH0XI124769 Enhancer 0.4 UCNEbase 0.2 -80.5 -80539 0.3 RPS26P57 GC0XM125062 TENM1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS26P57 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS26P57 Gene

Genomic Locations for RPS26P57 Gene
chrX:124,688,504-124,688,838
(GRCh38/hg38)
Size:
335 bases
Orientation:
Minus strand
chrX:123,822,354-123,822,688
(GRCh37/hg19)

Genomic View for RPS26P57 Gene

Genes around RPS26P57 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS26P57 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS26P57 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS26P57 Gene

Proteins for RPS26P57 Gene

Post-translational modifications for RPS26P57 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS26P57 Gene

Domains & Families for RPS26P57 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS26P57 Gene

Function for RPS26P57 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS26P57 Gene

Localization for RPS26P57 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS26P57 Gene

Pathways & Interactions for RPS26P57 Gene

SuperPathways for RPS26P57 Gene

No Data Available

Interacting Proteins for RPS26P57 Gene

Gene Ontology (GO) - Biological Process for RPS26P57 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS26P57 Gene

Drugs & Compounds for RPS26P57 Gene

No Compound Related Data Available

Transcripts for RPS26P57 Gene

mRNA/cDNA for RPS26P57 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS26P57 Gene

No ASD Table

Relevant External Links for RPS26P57 Gene

GeneLoc Exon Structure for
RPS26P57
ECgene alternative splicing isoforms for
RPS26P57

Expression for RPS26P57 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS26P57 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS26P57 Gene:

RPS26P57
genes like me logo Genes that share expression patterns with RPS26P57: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS26P57 Gene

Orthologs for RPS26P57 Gene

Evolution for RPS26P57 Gene

ENSEMBL:
Gene Tree for RPS26P57 (if available)
TreeFam:
Gene Tree for RPS26P57 (if available)

No data available for Orthologs for RPS26P57 Gene

Paralogs for RPS26P57 Gene

No data available for Paralogs for RPS26P57 Gene

Variants for RPS26P57 Gene

Additional Variant Information for RPS26P57 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS26P57

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS26P57 Gene

Disorders for RPS26P57 Gene

Additional Disease Information for RPS26P57

Genetic Association Database
(GAD)

No disorders were found for RPS26P57 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS26P57 Gene

Publications for RPS26P57 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 44 58
  3. Genome-wide association study for subclinical atherosclerosis in major arterial territories in the NHLBI's Framingham Heart Study. (PMID: 17903303) O'Donnell CJ … Demissie S (BMC medical genetics 2007) 44 58

Products for RPS26P57 Gene

Sources for RPS26P57 Gene

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