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Aliases for RPS26P11 Gene

Aliases for RPS26P11 Gene

  • Ribosomal Protein S26 Pseudogene 11 2 3 5
  • Ribosomal Protein S26-Like 1 2 3
  • RPS26L1 3 4
  • RPS26_22_1784 3
  • BA366E13.1 3

External Ids for RPS26P11 Gene

Previous HGNC Symbols for RPS26P11 Gene

  • RPS26L1

Previous GeneCards Identifiers for RPS26P11 Gene

  • GC0XP071181

Summaries for RPS26P11 Gene

GeneCards Summary for RPS26P11 Gene

RPS26P11 (Ribosomal Protein S26 Pseudogene 11) is a Pseudogene.

Additional gene information for RPS26P11 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS26P11 Gene

Genomics for RPS26P11 Gene

Regulatory Elements for RPS26P11 Gene

Enhancers for RPS26P11 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XH071181 2 FANTOM5 Ensembl ENCODE dbSUPER 10.7 -861.5 -861538 3 PKNOX1 FOXA2 ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 YY1 ZNF766 TAF1 NONO OGT MED12 LOC100420758 ENSG00000229601 ARR3 P2RY4 RTL5 RPS23P8
GH0XH072272 1.1 ENCODE 10.7 +230.5 230497 5 HDGF ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF207 ZNF143 TAF1 NONO LOC100420758 ERCC6L OGT RTL5 LOC392489 ENSG00000229601 TOMM20P4 NAP1L2
GH0XH071250 1 ENCODE 10.7 -790.6 -790623 6 HDGF PKNOX1 ARNT SIN3A FEZF1 GLI4 ZNF2 BRCA1 YY1 ZNF766 TAF1 LOC100420758 MED12 NONO OGT ERCC6L ARR3 ENSG00000229601 SNX12 P2RY4
GH0XH072044 0.8 Ensembl ENCODE 0.7 +1.6 1597 2 GATA3 RFX1 NFYB RCOR1 RFX5 TCF7L2 RTL5 NHSL2 PIN4 RPS26P11 PIR42075
GH0XH072028 1.2 Ensembl ENCODE 0.4 -14.5 -14544 2 TBP FOXA2 PKNOX1 INSM2 RFX5 YY1 RCOR1 FOS DEK EGR2 RTL5 NHSL2 PIN4 RPS26P11 RNU6-1078P GC0XM071966
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS26P11 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS26P11 Gene

Chromosome:
X
Start:
72,044,409 bp from pter
End:
72,044,974 bp from pter
Size:
566 bases
Orientation:
Plus strand

Genomic View for RPS26P11 Gene

Genes around RPS26P11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS26P11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS26P11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS26P11 Gene

Proteins for RPS26P11 Gene

  • Protein details for RPS26P11 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5JNZ5-RS26L_HUMAN
    Recommended name:
    Putative 40S ribosomal protein S26-like 1
    Protein Accession:
    Q5JNZ5

    Protein attributes for RPS26P11 Gene

    Size:
    115 amino acids
    Molecular mass:
    13002 Da
    Quaternary structure:
    No Data Available

neXtProt entry for RPS26P11 Gene

Post-translational modifications for RPS26P11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS26P11 Gene

Domains & Families for RPS26P11 Gene

Protein Domains for RPS26P11 Gene

InterPro:
Blocks:
ProtoNet:

Suggested Antigen Peptide Sequences for RPS26P11 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q5JNZ5

UniProtKB/Swiss-Prot:

RS26L_HUMAN :
  • Belongs to the eukaryotic ribosomal protein eS26 family.
Family:
  • Belongs to the eukaryotic ribosomal protein eS26 family.
genes like me logo Genes that share domains with RPS26P11: view

No data available for Gene Families for RPS26P11 Gene

Function for RPS26P11 Gene

Phenotypes for RPS26P11 Gene

GenomeRNAi human phenotypes for RPS26P11:
genes like me logo Genes that share phenotypes with RPS26P11: view

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS26P11
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS26P11 Gene

Localization for RPS26P11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS26P11 Gene

Pathways & Interactions for RPS26P11 Gene

SuperPathways for RPS26P11 Gene

No Data Available

Interacting Proteins for RPS26P11 Gene

Selected Interacting proteins: Q5JNZ5-RS26L_HUMAN for RPS26P11 Gene via IID

Gene Ontology (GO) - Biological Process for RPS26P11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS26P11 Gene

Drugs & Compounds for RPS26P11 Gene

No Compound Related Data Available

Transcripts for RPS26P11 Gene

mRNA/cDNA for RPS26P11 Gene

(1) Additional mRNA sequences :
(4) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RPS26P11 Gene

Ribosomal protein S26 pseudogene 11:
Representative Sequences:

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS26P11
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPS26P11 Gene

No ASD Table

Relevant External Links for RPS26P11 Gene

GeneLoc Exon Structure for
RPS26P11
ECgene alternative splicing isoforms for
RPS26P11

Expression for RPS26P11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS26P11 Gene

Protein differential expression in normal tissues from HIPED for RPS26P11 Gene

This gene is overexpressed in Ovary (48.7) and Lung (7.5).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for RPS26P11 Gene



Protein tissue co-expression partners for RPS26P11 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS26P11 Gene:

RPS26P11

SOURCE GeneReport for Unigene cluster for RPS26P11 Gene:

Hs.449523
genes like me logo Genes that share expression patterns with RPS26P11: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS26P11 Gene

Orthologs for RPS26P11 Gene

Evolution for RPS26P11 Gene

ENSEMBL:
Gene Tree for RPS26P11 (if available)
TreeFam:
Gene Tree for RPS26P11 (if available)

No data available for Orthologs for RPS26P11 Gene

Paralogs for RPS26P11 Gene

(1) SIMAP similar genes for RPS26P11 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with RPS26P11: view

No data available for Paralogs for RPS26P11 Gene

Variants for RPS26P11 Gene

Sequence variations from dbSNP and Humsavar for RPS26P11 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs1001031493 -- 72,043,081(+) CCACA(A/G)TTGAT intron-variant, upstream-variant-2KB
rs1001080643 -- 72,043,558(+) CCCCA(A/G)GCACT intron-variant, upstream-variant-2KB
rs1008638525 -- 72,044,047(+) AGGAC(A/G)GTGGG intron-variant, upstream-variant-2KB
rs1008770006 -- 72,044,590(+) GCCGC(A/G)GCCAC intron-variant, nc-transcript-variant
rs1009720629 -- 72,043,006(+) CAGGC(C/T)TGGAC intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for RPS26P11 Gene

Variant ID Type Subtype PubMed ID
esv2758872 CNV loss 17122850

Relevant External Links for RPS26P11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS26P11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for RPS26P11 Gene

Disorders for RPS26P11 Gene

Relevant External Links for RPS26P11

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RPS26P11

No disorders were found for RPS26P11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS26P11 Gene

Publications for RPS26P11 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross MT … Bentley DR (Nature 2005) 3 4 60
  3. Architecture of the human interactome defines protein communities and disease networks. (PMID: 28514442) Huttlin EL … Harper JW (Nature 2017) 3 60
  4. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin EL … Gygi SP (Cell 2015) 3 60
  5. Quantitative Proteomics Reveals Dynamic Interactions of the Minichromosome Maintenance Complex (MCM) in the Cellular Response to Etoposide Induced DNA Damage. (PMID: 25963833) Drissi R … Boisvert FM (Molecular & cellular proteomics : MCP 2015) 3 60

Products for RPS26P11 Gene

Sources for RPS26P11 Gene

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