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Aliases for RPS25P4 Gene

Aliases for RPS25P4 Gene

  • Ribosomal Protein S25 Pseudogene 4 2 3
  • RPS25_2_371 3
  • AC092035.1 5

External Ids for RPS25P4 Gene

Previous GeneCards Identifiers for RPS25P4 Gene

  • GC03M053484

Summaries for RPS25P4 Gene

GeneCards Summary for RPS25P4 Gene

RPS25P4 (Ribosomal Protein S25 Pseudogene 4) is a Pseudogene.

Additional gene information for RPS25P4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS25P4 Gene

Genomics for RPS25P4 Gene

GeneHancer (GH) Regulatory Elements for RPS25P4 Gene

Promoters and enhancers for RPS25P4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I053477 Enhancer 1.1 ENCODE dbSUPER 0.8 -4.0 -4033 3.3 FOXA2 MLX ARID4B YY1 ATF7 SP5 REST PPARG KAT8 NFIL3 DCP1A PRKCD RPS25P4 GC03P053524 CACNA1D
GH03I053492 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE dbSUPER 0.4 -18.7 -18714 2.3 CTCF MXI1 SIN3A ZIC2 ZEB1 CTBP1 POLR2A PATZ1 EZH2 MAZ CACNA1D ACTR8 DCP1A TKT RFT1 RPS25P4 GC03P053524
GH03I053495 Promoter/Enhancer 1.2 EPDnew Ensembl dbSUPER 0.3 -20.6 -20602 1.4 MXI1 USF1 SUZ12 ZNF444 EZH2 CACNA1D PRKCD RPS25P4 GC03P053524
GH03I053517 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 -44.0 -44008 2.8 ESRRA JUN ZNF140 SIN3A CEBPG RAD21 YY1 GATA3 RCOR1 FOSL2 GLT8D1 RFT1 CACNA1D SNORD38C PBRM1 NT5DC2 TKT GC03P053524 RPS25P4
GH03I053505 Enhancer 0.8 ENCODE dbSUPER 0.3 -31.3 -31299 1.4 FOXA2 RXRA TAF1 MAX REST RAD21 ATF2 FOXA1 GABPA YY1 ENSG00000251987 GC03P053524 RPS25P4 CACNA1D
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS25P4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS25P4 Gene

Genomic Locations for RPS25P4 Gene
chr3:53,474,657-53,475,148
(GRCh38/hg38)
Size:
492 bases
Orientation:
Minus strand
chr3:53,508,684-53,509,175
(GRCh37/hg19)

Genomic View for RPS25P4 Gene

Genes around RPS25P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS25P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS25P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS25P4 Gene

Proteins for RPS25P4 Gene

Post-translational modifications for RPS25P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS25P4 Gene

Domains & Families for RPS25P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS25P4 Gene

Function for RPS25P4 Gene

Phenotypes From GWAS Catalog for RPS25P4 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS25P4 Gene

Localization for RPS25P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS25P4 Gene

Pathways & Interactions for RPS25P4 Gene

SuperPathways for RPS25P4 Gene

No Data Available

Interacting Proteins for RPS25P4 Gene

Gene Ontology (GO) - Biological Process for RPS25P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS25P4 Gene

Drugs & Compounds for RPS25P4 Gene

No Compound Related Data Available

Transcripts for RPS25P4 Gene

mRNA/cDNA for RPS25P4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS25P4 Gene

No ASD Table

Relevant External Links for RPS25P4 Gene

GeneLoc Exon Structure for
RPS25P4
ECgene alternative splicing isoforms for
RPS25P4

Expression for RPS25P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS25P4 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS25P4 Gene:

RPS25P4
genes like me logo Genes that share expression patterns with RPS25P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS25P4 Gene

Orthologs for RPS25P4 Gene

Evolution for RPS25P4 Gene

ENSEMBL:
Gene Tree for RPS25P4 (if available)
TreeFam:
Gene Tree for RPS25P4 (if available)

No data available for Orthologs for RPS25P4 Gene

Paralogs for RPS25P4 Gene

No data available for Paralogs for RPS25P4 Gene

Variants for RPS25P4 Gene

Additional Variant Information for RPS25P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS25P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS25P4 Gene

Disorders for RPS25P4 Gene

No disorders were found for RPS25P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS25P4 Gene

Publications for RPS25P4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS25P4 Gene

Sources for RPS25P4 Gene

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