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Aliases for RPS23P6 Gene

Aliases for RPS23P6 Gene

  • Ribosomal Protein S23 Pseudogene 6 2 3 5
  • RPS23_4_1473 3

External Ids for RPS23P6 Gene

Previous GeneCards Identifiers for RPS23P6 Gene

  • GC16U900947
  • GC16P012176

Summaries for RPS23P6 Gene

GeneCards Summary for RPS23P6 Gene

RPS23P6 (Ribosomal Protein S23 Pseudogene 6) is a Pseudogene.

Additional gene information for RPS23P6 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS23P6 Gene

Genomics for RPS23P6 Gene

Regulatory Elements for RPS23P6 Gene

Enhancers for RPS23P6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16H012077 1.1 Ensembl ENCODE dbSUPER 0.7 -1.6 -1640 4 PKNOX1 HLF ZSCAN4 ELF1 MLLT1 RUNX3 SPI1 GSPT1 SNX29 LOC642696 RPS23P6 ENSG00000260488
GH16H012061 1.4 Ensembl ENCODE dbSUPER 0.4 -18.5 -18471 2 ZNF493 ZFP64 BRCA1 ZNF143 FOS KLF7 ZNF202 ZC3H11A REST TSHZ1 LOC105371084 ENSG00000261560 HNRNPCP4 ZC3H7A NPIPB2 COX6CP1 ENSG00000261216 SOCS1 TXNDC11 RSL1D1
GH16H012075 0.7 ENCODE dbSUPER 0.7 -4.9 -4864 1 FOXA2 FOXA3 FOXA1 NPIPB2 TNFRSF17 ENSG00000261216 RPS23P6 ENSG00000260488
GH16H012089 1.2 Ensembl ENCODE dbSUPER 0.4 +8.4 8436 1 L3MBTL2 NRF1 KLF17 ZIC2 FOSL1 ZNF121 CTBP1 POLR2A FOS ZNF600 LOC642696 RPS23P6
GH16H012067 0.9 ENCODE 0.4 -13.2 -13189 0 ELF3 ARNT ARID4B ZNF2 ZSCAN9 RAD21 RARA ZNF143 RUNX3 MIXL1 RPS23P6 ENSG00000260488
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS23P6 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS23P6 Gene

Chromosome:
16
Start:
12,081,237 bp from pter
End:
12,081,902 bp from pter
Size:
666 bases
Orientation:
Plus strand

Genomic View for RPS23P6 Gene

Genes around RPS23P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS23P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS23P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS23P6 Gene

Proteins for RPS23P6 Gene

Post-translational modifications for RPS23P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS23P6 Gene

Domains & Families for RPS23P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS23P6 Gene

Function for RPS23P6 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS23P6
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS23P6 Gene

Localization for RPS23P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS23P6 Gene

Pathways & Interactions for RPS23P6 Gene

SuperPathways for RPS23P6 Gene

No Data Available

Interacting Proteins for RPS23P6 Gene

Gene Ontology (GO) - Biological Process for RPS23P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS23P6 Gene

Drugs & Compounds for RPS23P6 Gene

No Compound Related Data Available

Transcripts for RPS23P6 Gene

mRNA/cDNA for RPS23P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS23P6
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPS23P6 Gene

No ASD Table

Relevant External Links for RPS23P6 Gene

GeneLoc Exon Structure for
RPS23P6
ECgene alternative splicing isoforms for
RPS23P6

Expression for RPS23P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS23P6 Gene

mRNA differential expression in normal tissues according to GTEx for RPS23P6 Gene

This gene is overexpressed in Kidney - Cortex (x6.1).

NURSA nuclear receptor signaling pathways regulating expression of RPS23P6 Gene:

RPS23P6
genes like me logo Genes that share expression patterns with RPS23P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS23P6 Gene

Orthologs for RPS23P6 Gene

Evolution for RPS23P6 Gene

ENSEMBL:
Gene Tree for RPS23P6 (if available)
TreeFam:
Gene Tree for RPS23P6 (if available)

No data available for Orthologs for RPS23P6 Gene

Paralogs for RPS23P6 Gene

No data available for Paralogs for RPS23P6 Gene

Variants for RPS23P6 Gene

Relevant External Links for RPS23P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS23P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS23P6 Gene

Disorders for RPS23P6 Gene

Relevant External Links for RPS23P6

Genetic Association Database (GAD)
RPS23P6

No disorders were found for RPS23P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS23P6 Gene

Publications for RPS23P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. Genome-wide association with select biomarker traits in the Framingham Heart Study. (PMID: 17903293) Benjamin EJ … Vasan RS (BMC medical genetics 2007) 45 60

Products for RPS23P6 Gene

Sources for RPS23P6 Gene

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