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Aliases for RPS23P6 Gene

Aliases for RPS23P6 Gene

  • Ribosomal Protein S23 Pseudogene 6 2 3 5
  • RPS23_4_1473 3

External Ids for RPS23P6 Gene

Previous GeneCards Identifiers for RPS23P6 Gene

  • GC16U900947
  • GC16P012176

Summaries for RPS23P6 Gene

GeneCards Summary for RPS23P6 Gene

RPS23P6 (Ribosomal Protein S23 Pseudogene 6) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS23P6 Gene

Genomics for RPS23P6 Gene

Regulatory Elements for RPS23P6 Gene

Enhancers for RPS23P6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16G012077 1.3 Ensembl ENCODE dbSUPER 0.7 -1.6 -1640 4.0 ELF3 DRAP1 CTCF PKNOX1 NFIB ZSCAN4 ZMYM3 CEBPG ZBTB40 RAD21 GSPT1 SNX29 LOC642696 RPS23P6 ENSG00000260488
GH16G012075 0.9 ENCODE dbSUPER 0.7 -4.9 -4864 1.3 FOXA2 FOXA3 BHLHE40 MNT FOXA1 ZFHX2 HDAC2 EGR1 NBN EGR2 NPIPB2 TNFRSF17 ENSG00000261216 RPS23P6 ENSG00000260488
GH16G012061 1.5 Ensembl ENCODE dbSUPER 0.4 -18.5 -18471 2.5 ZNF493 ZFP64 BRCA1 ZNF143 KLF7 FOS ZNF202 REST TSHZ1 ZNF623 LOC105371084 ENSG00000261560 ZC3H7A HNRNPCP4 NPIPB2 COX6CP1 ENSG00000261216 RSL1D1 RPS23P6 ENSG00000260488
GH16G012089 1.2 Ensembl ENCODE dbSUPER 0.4 +8.4 8436 1.5 TEAD4 KLF17 ZIC2 FOSL1 ZNF121 GATA2 POLR2A ZNF600 FOS CREM LOC642696 RPS23P6
GH16G012081 0.6 ENCODE dbSUPER 0.7 +1.1 1056 0.6 BHLHE40 GSPT1 LOC642696 RPS23P6
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS23P6 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS23P6 Gene

Chromosome:
16
Start:
12,081,237 bp from pter
End:
12,081,902 bp from pter
Size:
666 bases
Orientation:
Plus strand

Genomic View for RPS23P6 Gene

Genes around RPS23P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS23P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS23P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS23P6 Gene

Proteins for RPS23P6 Gene

Post-translational modifications for RPS23P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS23P6 Gene

Domains & Families for RPS23P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS23P6 Gene

Function for RPS23P6 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS23P6 Gene

Localization for RPS23P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS23P6 Gene

Pathways & Interactions for RPS23P6 Gene

SuperPathways for RPS23P6 Gene

No Data Available

Interacting Proteins for RPS23P6 Gene

Gene Ontology (GO) - Biological Process for RPS23P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS23P6 Gene

Drugs & Compounds for RPS23P6 Gene

No Compound Related Data Available

Transcripts for RPS23P6 Gene

mRNA/cDNA for RPS23P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS23P6 Gene

No ASD Table

Relevant External Links for RPS23P6 Gene

GeneLoc Exon Structure for
RPS23P6
ECgene alternative splicing isoforms for
RPS23P6

Expression for RPS23P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS23P6 Gene

mRNA differential expression in normal tissues according to GTEx for RPS23P6 Gene

This gene is overexpressed in Kidney - Cortex (x6.1).

NURSA nuclear receptor signaling pathways regulating expression of RPS23P6 Gene:

RPS23P6
genes like me logo Genes that share expression patterns with RPS23P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS23P6 Gene

Orthologs for RPS23P6 Gene

Evolution for RPS23P6 Gene

ENSEMBL:
Gene Tree for RPS23P6 (if available)
TreeFam:
Gene Tree for RPS23P6 (if available)

No data available for Orthologs for RPS23P6 Gene

Paralogs for RPS23P6 Gene

No data available for Paralogs for RPS23P6 Gene

Variants for RPS23P6 Gene

Relevant External Links for RPS23P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS23P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS23P6 Gene

Disorders for RPS23P6 Gene

Relevant External Links for RPS23P6

Genetic Association Database (GAD)
RPS23P6

No disorders were found for RPS23P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS23P6 Gene

Publications for RPS23P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association with select biomarker traits in the Framingham Heart Study. (PMID: 17903293) Benjamin E.J. … Vasan R.S. (BMC Med. Genet. 2007) 46 64

Products for RPS23P6 Gene

Sources for RPS23P6 Gene

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