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Aliases for RPS23P1 Gene

Aliases for RPS23P1 Gene

  • Ribosomal Protein S23 Pseudogene 1 2 3 5
  • RPS23_3_930 3

External Ids for RPS23P1 Gene

Previous GeneCards Identifiers for RPS23P1 Gene

  • GC08U990144
  • GC08P098545
  • GC08P098833
  • GC08P098946
  • GC08P098878

Summaries for RPS23P1 Gene

GeneCards Summary for RPS23P1 Gene

RPS23P1 (Ribosomal Protein S23 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS23P1 Gene

Genomics for RPS23P1 Gene

Regulatory Elements for RPS23P1 Gene

Enhancers for RPS23P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08F097887 0.6 Ensembl ENCODE 13.2 +22.8 22815 1.1 JUND RAD51 L3MBTL2 SMAD4 MNT MGA RPS23P1 RPL30 ENSG00000245970 SNORA72 MATN2 GC08P097916
GH08F097889 0.4 ENCODE 12.7 +25.8 25826 1.7 ATF1 TBL1XR1 TAL1 ZIC2 FOXK2 NCOR1 POLR2A TRIM24 CREM MTA2 MATN2 RPS23P1 ENSG00000202399 LAPTM4B ERICH5 GC08P097916
GH08F097908 0.8 Ensembl ENCODE 11.8 +44.4 44357 1.0 JUND ATF3 MATN2 RPS23P1 GC08P097916
GH08F097905 0.6 ENCODE 11.8 +41.4 41405 1.1 JUND CEBPA BHLHE40 CEBPB KDM1A MATN2 RPS23P1 GC08P097916
GH08F097896 0.4 ENCODE 11.8 +32.5 32531 2.4 HDAC1 ZNF175 BACH1 CEBPG ZKSCAN1 CREM ZNF639 SMARCA5 ZNF197 L3MBTL2 MATN2 RPS23P1 GC08P097916
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPS23P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS23P1 Gene

Chromosome:
8
Start:
97,865,025 bp from pter
End:
97,865,529 bp from pter
Size:
505 bases
Orientation:
Plus strand

Genomic View for RPS23P1 Gene

Genes around RPS23P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS23P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS23P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS23P1 Gene

Proteins for RPS23P1 Gene

Post-translational modifications for RPS23P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS23P1 Gene

Domains & Families for RPS23P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS23P1 Gene

Function for RPS23P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS23P1 Gene

Localization for RPS23P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS23P1 Gene

Pathways & Interactions for RPS23P1 Gene

SuperPathways for RPS23P1 Gene

No Data Available

Interacting Proteins for RPS23P1 Gene

Gene Ontology (GO) - Biological Process for RPS23P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS23P1 Gene

Transcripts for RPS23P1 Gene

mRNA/cDNA for RPS23P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS23P1 Gene

No ASD Table

Relevant External Links for RPS23P1 Gene

GeneLoc Exon Structure for
RPS23P1
ECgene alternative splicing isoforms for
RPS23P1

Expression for RPS23P1 Gene

mRNA expression in normal human tissues for RPS23P1 Gene

mRNA differential expression in normal tissues according to GTEx for RPS23P1 Gene

This gene is overexpressed in Ovary (x4.1) and Nerve - Tibial (x4.0).

NURSA nuclear receptor signaling pathways regulating expression of RPS23P1 Gene:

RPS23P1
genes like me logo Genes that share expression patterns with RPS23P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS23P1 Gene

Orthologs for RPS23P1 Gene

Evolution for RPS23P1 Gene

ENSEMBL:
Gene Tree for RPS23P1 (if available)
TreeFam:
Gene Tree for RPS23P1 (if available)

No data available for Orthologs for RPS23P1 Gene

Paralogs for RPS23P1 Gene

No data available for Paralogs for RPS23P1 Gene

Variants for RPS23P1 Gene

Relevant External Links for RPS23P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS23P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS23P1 Gene

Disorders for RPS23P1 Gene

No disorders were found for RPS23P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS23P1 Gene

Publications for RPS23P1 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS23P1 Gene

Sources for RPS23P1 Gene

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