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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

RPS23 Gene

protein-coding   GIFtS: 57
GCID: GC05M081569

ribosomal protein S23
 Explore 9 diseases affiliated with
RPS23 via
MalaCards
our new
 Human Malady Compendium 
Biological research products
for RPS23    

Aliases
for RPS23 gene

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section
Aliases
Ribosomal Protein S231 2
S231 2
40S Ribosomal Protein S232
Homolog Of Yeast Ribosomal Protein S282

External Ids:    HGNC: 104101   Entrez Gene: 62282   Ensembl: ENSG000001864687   OMIM: 6036835   UniProtKB: P622663   

Export aliases for RPS23 gene to outside databases

Previous GC identifers: GC05M080389 GC05M081796 GC05M081608 GC05M081655 GC05M081607 GC05M076778


Summaries
for RPS23 gene

(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section
Entrez Gene summary for RPS23:
Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit.
Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene
encodes a ribosomal protein that is a component of the 40S subunit. The protein belongs to the S12P family of
ribosomal proteins. It is located in the cytoplasm. The protein shares significant amino acid similarity with S.
cerevisiae ribosomal protein S28. As is typical for genes encoding ribosomal proteins, there are multiple processed
pseudogenes of this gene dispersed through the genome. (provided by RefSeq, Jul 2008)

Gene Wiki entry for RPS23


Genomic Views
for RPS23 gene

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000005.9  NC_018916.1  NT_006713.15  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the RPS23 gene promoter:
         Elk-1   Nkx2-2   SREBP-1c   Olf-1   SREBP-1b   MEF-2A   SREBP-1a   FOXO1a   aMEF-2   ATF6   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmid: RPS23 promoter sequence
   Search SABiosciences Chromatin IP Primers for RPS23

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat RPS23


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 5q14.2   Ensembl cytogenetic band:  5q14.2   HGNC cytogenetic band: 5q14.1

RPS23 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
RPS23 gene location

GeneLoc information about chromosome 5         GeneLoc Exon Structure

GeneLoc location for GC05M081569:  view genomic region     (about GC identifiers)

Start:
 81,569,139 bp from pter      End:
 81,574,396 bp from pter
Size:
 5,258 bases      Orientation:
 minus strand

Proteins
for RPS23 gene

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section
UniProtKB/Swiss-Prot: RS23_HUMAN, P62266 (See protein sequence)
Recommended Name: 40S ribosomal protein S23  
Size: 143 amino acids; 15808 Da
Secondary accessions: P39028 Q6IB08

Explore the universe of human proteins at neXtProt for RPS23: NX_P62266

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P62266

    • RPS23 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_001016.1  
    ENSEMBL proteins: 
     ENSP00000296674   ENSP00000427043   ENSP00000425865   ENSP00000425833   ENSP00000422071  
     ENSP00000420900  
    Reactome Protein details: P62266
    Human Recombinant Protein Products: 
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    OriGene Protein Over-expression Lysate: RPS23
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    Novus Biologicals RPS23 Protein
    Novus Biologicals RPS23 Lysate
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for RPS23

    Gene Ontology (GO): 4 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005829cytosol TAS--
    GO:0005840ribosome NAS8415000
    GO:0015935small ribosomal subunit ----
    GO:0022627cytosolic small ribosomal subunit IDA8706699


    RPS23 for ontologies           About GeneDecksing



    RPS23 Antibody Products: 
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    Uscn ELISAs and CLIAs for RPS23

    Protein Domains /
    Families
    for RPS23 gene

    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section
    RPS23 for domains           About GeneDecksing

    3 InterPro domains/families:
     IPR006032 Ribosomal_S12/S23
     IPR012340 NA-bd_OB-fold
     IPR005680 Ribosomal_S23_euk/arc

    Graphical View of Domain Structure for InterPro Entry P62266

    ProtoNet protein and cluster: P62266

    UniProtKB/Swiss-Prot: RS23_HUMAN, P62266
    Similarity: Belongs to the ribosomal protein S12P family


    Function
    for RPS23 gene

    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section
    Function Summary:
         Genatlas biochemistry entry for RPS23:
    60S ribosomal protein S23

    miRNA
    Products:            		 OriGene 3'-UTR Clone: RPS23
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat RPS23
    3 QIAGEN miScript miRNA Assays for microRNAs that regulate RPS23:
    hsa-miR-556-3p hsa-miR-3647-3p hsa-miR-4282
    SwitchGear 3'UTR luciferase reporter plasmid: RPS23 3' UTR sequence
    Inhib. RNA
    Products:            		Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for RPS23 (see all 7)
    OriGene shRNA RFP: RPS23
    OriGene siRNA: RPS23
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat RPS23

    Gene Editing
    Products:    		DNA2.0 Custom Protein Engineering Service for RPS23

    Clone
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    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for RPS23 (see all 4)
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    GenScript: all cDNA clones in your preferred vector: RPS23 (NM_001025)
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    DNA2.0 Custom Codon Optimized Gene Synthesis Service for RPS23
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat RPS23 

    Cell Line
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    Search LifeMap BioReagents cell lines for RPS23

    In Situ Assay
    Products:       
         		Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RPS23

    Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003674molecular_function ND--
    GO:0003735structural constituent of ribosome IEA--
    GO:0005515protein binding IPI--


    RPS23 for ontologies           About GeneDecksing


    4 GenomeRNAi human phenotypes for RPS23:
     Decreased Hepatitis C virus re  Increased S DNA content  Increased gamma-H2AX phosphory  Synthetic lethal with c-Myc af 


    Pathways & Interactions
    for RPS23 gene

    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/6 super-pathways (see all 6) About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Synthesis of PB1-F2
    8/26 pathways (see all 26)
    		Viral Protein Synthesis1.00
    		Cytoplasmic Ribosomal Proteins0.86
    		Viral mRNA Translation1.00
    		CFTR translational fidelity (class I mutations)0.83
    		Influenza Viral RNA Transcription and Replication1.00
    		SMG6 Cleaves mRNA with Premature Termination Codon0.80
    		Synthesis of nascent polypeptide containing signal sequence1.00
    		L13a-mediated translational silencing of Ceruloplasmin expression0.79
    2Translation initiation complex formation
    		Translation initiation complex formation1.00
    		Ribosomal scanning and start codon recognition0.96
    		Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S0.98
    		Formation of the ternary complex, and subsequently, the 43S complex0.87
    3Metabolism of mRNA
    		Metabolism of mRNA1.00
    		Metabolism of RNA0.92
    4Disease
    		Disease1.00
    5Generic Transcription Pathway
    		Gene Expression0.46

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    1 GeneGo (Thomson Reuters) Pathway for RPS23
        CFTR translational fidelity (class I mutations)

    1 BioSystems Pathway for RPS23 
        Cytoplasmic Ribosomal Proteins

    5/32        Reactome Pathways for RPS23 (see all 32)
        Formation of a pool of free 40S subunits
    Synthesis of PB1-F2
    SMG6 Cleaves mRNA with Premature Termination Codon
    Influenza Life Cycle
    Viral mRNA Translation


    1         Kegg Pathway  (Kegg details for RPS23):
        Ribosome


    RPS23 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for RPS23

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/374 Interacting proteins for RPS23 (P622661, 2, 3 ENSP000002966744) via UniProtKB, MINT, STRING, and/or I2D (see all 374)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    RPS2P158802, 3, ENSP000003418854MINT-6542674 MINT-6488590 I2D: score=3 STRING: ENSP00000341885
    RPS3P233962, 3, ENSP000002785724MINT-6542674 MINT-6488590 I2D: score=3 STRING: ENSP00000278572
    RPL6Q028782, 3, ENSP000002027734MINT-6542674 MINT-6488590 I2D: score=1 STRING: ENSP00000202773
    RPL35P427662, 3, ENSP000002594694MINT-6488590 I2D: score=5 STRING: ENSP00000259469
    RPL26P612542, 3MINT-6542674 MINT-6488590 I2D: score=4 
    About this table

    Gene Ontology (GO): 5/13 biological process terms (GO ID links to tree view) (see all 13):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000184nuclear-transcribed mRNA catabolic process, nonsense-mediated decay TAS--
    GO:0006412translation TAS--
    GO:0006413translational initiation TAS--
    GO:0006414translational elongation TAS--
    GO:0006415translational termination TAS--


    RPS23 for ontologies           About GeneDecksing



    Drugs & Compounds
    for RPS23 gene

    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for RPS23
    Search CenterWatch for drugs/clinical trials and news about RPS23 / RS23 

    Transcripts
    for RPS23 gene

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section
    REFSEQ mRNAs for RPS23 gene: 
    NM_001025.4  

    Unigene Cluster for RPS23:

    Ribosomal protein S23
    Hs.527193  [show with all ESTs]
    Unigene Representative Sequence: AK125939
    8 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000296674(uc003khu.3) ENST00000510210 ENST00000512493 ENST00000510019
    ENST00000507980 ENST00000504293 ENST00000503605 ENST00000511844

    miRNA
    Products:             		 OriGene 3'-UTR Clone: RPS23
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat RPS23
    3 QIAGEN miScript miRNA Assays for microRNAs that regulate RPS23:
    hsa-miR-556-3p hsa-miR-3647-3p hsa-miR-4282
    SwitchGear 3'UTR luciferase reporter plasmid: RPS23 3' UTR sequence
    Inhib. RNA
    Products:             		Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for RPS23 (see all 7)
    OriGene shRNA RFP: RPS23
    OriGene siRNA: RPS23
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat RPS23
    Clone
    Products:             		 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for RPS23 (see all 4)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for RPS23
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: RPS23 (NM_001025)
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    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat RPS23 
    Primer
    Products:            		 OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for RPS23
    Browse OriGene validated miRNA SYBR primer pairs
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      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat RPS23
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat RPS23

    Additional cDNA sequence: 

    AK092335.1 AK125939.1 AK291132.1 AK311772.1 BC046998.1 BC070221.1 BX647563.1 CR456996.1 
    D14530.1 M32219.1 

    24/54 DOTS entries (see all 54):

    DT.91866256  DT.100706573  DT.100706557  DT.100706570  DT.100869920  DT.95280798  DT.100706560  DT.100868645 
    DT.100706558  DT.95109956  DT.95280794  DT.100801358  DT.100861683  DT.450305  DT.120863112  DT.100059971 
    DT.75147562  DT.120863261  DT.101955245  DT.100706555  DT.101954600  DT.86997486  DT.87016920  DT.100706559 

    24/1379 AceView cDNA sequences (see all 1379):

    BU543854 BU556480 CB125018 CB125820 AW043594 AA644214 T52918 BQ214950 
    F35069 BM808649 BM874730 BF791758 AA630443 BQ676020 CB136828 N64072 
    CB178703 CB125352 BG114839 AU076496 AA234721 BM676985 BQ227908 CB126354 

    GeneLoc Exon Structure

    5 Alternative Splicing Database (ASD) splice patterns (SP) for RPS23    About this scheme

    ExUns: 1a · 1b ^ 2a · 2b ^ 3 ^ 4 ^ 5a · 5b · 5c · 5d ^ 6 ^ 7
    SP1:                                            -     -     -               
    SP2:              -     -                                                   
    SP3:                                                                        
    SP4:              -     -                                                   
    SP5:                                                                        


    ECgene alternative splicing isoforms for RPS23

    Expression
    for RPS23 gene

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    RPS23 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CTGTTGGTGA

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)
    About this image
    See RPS23 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for RPS23

    SOURCE GeneReport for Unigene cluster: Hs.527193
        SABiosciences Custom PCR Arrays for RPS23
    Primer
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    In Situ
    Assay Products:     
         		Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RPS23

    Orthologs
    for RPS23 gene

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section
    This gene was present in the common ancestor of eukaryotes.

    Orthologs for RPS23 gene from 10/41 species (see all 41)    About this table
    Organism Taxonomic
    classification    		 Gene Description Human
    Similarity    		 Orthology
    Type    		 Details
    mouse
    (Mus musculus)    		 Mammalia Rps231 , 5 ribosomal protein S231, 5 89.74(n)1
    100(a)1    		   13 (46.46 cM)5
    664751  NM_024175.31  NP_077137.11 
     909231225 
    chicken
    (Gallus gallus)    		 Aves RPS231 ribosomal protein S23 83.92(n)
    100(a)    		   427323  XM_424903.3  XP_424903.3 
    lizard
    (Anolis carolinensis)    		 Reptilia RPS236
    		 --
    		 99(a)
    		 1 ↔ 1
    		 2(17980627-17982404)
    African clawed frog
    (Xenopus laevis)    		 Amphibia Xl.258362 Xenopus laevis transcribed sequence with strong similarity more 82.87(n)    CB591090.1 
    zebrafish
    (Danio rerio)    		 Actinopterygii rps231 ribosomal protein S23 84.15(n)
    98.6(a)    		   100000341  NM_001110121.1  NP_001103591.1 
    fruit fly
    (Drosophila melanogaster)    		 Insecta CG84153
    RpS231    		 protein biosynthesis structural constituent
    of more3
    Ribosomal protein S231    		 90(a)3
    76.46(n)1
    90.91(a)1    		   50E43
    365761  NM_137095.21  NP_610939.21 
    worm
    (Caenorhabditis elegans)    		 Secernentea rps-231 , 3 ribosomal protein S233
    Protein RPS-231    		 84(a)3
    71.79(n)1
    84.62(a)1    		   IV(12390368-12391480)3
    1781881  NM_069964.41  NP_502365.11 
    baker's yeast
    (Saccharomyces cerevisiae)    		 Saccharomycetes RPS23A(YGR118W)4
    RPS23A1    		 Ribosomal protein 28 (rp28) of the small (40S) ribosomal more4
    Rps23ap1    		 68.31(n)1
    78.17(a)1    		   7(726974-727730)4
    8530151, 4  NP_011633.31  NP_011633.14 
    thale cress
    (Arabidopsis thaliana)    		 eudicotyledons AT3G096801 40S ribosomal protein S23-1 69.95(n)
    76.06(a)    		   820125  NM_111802.1  NP_566351.1 
    rice
    (Oryza sativa)    		 Liliopsida Os.90752 Oryza sativa (japonica cultivar-group) cDNA cloneJ more 76.15(n)    AK102675.1 


    ENSEMBL Gene Tree for RPS23 (if available)
    TreeFam Gene Tree for RPS23 (if available) 

    Paralogs
    for RPS23 gene

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for RPS23 gene

    RPS23 for paralogs           About GeneDecksing


    5/11 Pseudogenes.org Pseudogenes for RPS23 (see all 11)
    PGOHUM00000248985 PGOHUM00000250844 PGOHUM00000244312 PGOHUM00000244313 PGOHUM00000245616


    Genomic Variants
    for RPS23 gene

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/151 NCBI SNPs in RPS23 are shown (see all 151)     About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance    		Chr 5 posSequence#AA
    Chg    		TypeMore#Allele
    freq    		PopTotal
    sample    		More
    ----------
    rs1133916091,2
    		C,--81568850(+) CTGGAC/TTCCAA 1 -- ds50011Minor allele frequency- T:0.50NA 2
    rs1121459571,2
    		C,--81568895(+) ACTGTG/ATTAAT 1 -- ds50012Minor allele frequency- A:0.07WA 120
    rs1874584411,2
    		--81568905(+) TCCTCC/TGCAGG 1 -- ds50010--------
    rs1474011261,2
    		--81568906(+) CCTCCA/GCAGGG 1 -- ds50010--------
    rs731387871,2
    		C,--81568934(+) CTGGCG/AAGGCG 1 -- ds50016Minor allele frequency- A:0.32NA WA CSA NS 393
    rs716362981,2
    		C,F,--81568947(+) CCACCG/AGGGCA 1 -- ds50012Minor allele frequency- A:0.50NA 4
    rs1831497661,2
    		--81568953(+) GGGCAA/GCTGCC 1 -- ds50010--------
    rs606015871,2
    		C,--81568966(+) CCCAGG/CAGCAC 1 -- ds50013Minor allele frequency- C:0.02WA NS 270
    rs1381304341,2
    		--81568998(+) GCTGGC/TCGGAG 1 -- ds50010--------
    rs1161511411,2
    		F,--81569000(+) TGGCCG/AGAGTC 1 -- ds50011Minor allele frequency- A:0.04WA 118

    HapMap Linkage Disequilibrium report for RPS23 (81569139 - 81574396 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for RPS23: --

    SABiosciences Cancer Mutation PCR Assays
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    Disorders / Diseases
    for RPS23 gene

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section
    RPS23 for disorders           About GeneDecksing

    OMIM gene information: 603683    OMIM disorders: --

    9 diseases for RPS23:    About MalaCards
    diamond-blackfan anemia    cancer progression/metastasis    pasteurellosis    ascariasis
    trichuriasis    endometriosis    colorectal cancer    anemia
    malaria

    1 disease from the University of Copenhagen DISEASES database for RPS23:
    Pasteurellosis

    Export disorders for RPS23 gene to outside databases

    Publications
    for RPS23 gene

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for RPS23 gene, integrated from 9 sources (see all 45):
    (articles sorted by number of sources associating them with RPS23)    		    Utopia: connect your pdf to the dynamic
    world of online information

    1. A map of 75 human ribosomal protein genes. (PubMed id 9582194)1, 2, 3 Kenmochi N.... Page D.C. (1998)
    2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    3. Characterization of the human small-ribosomal-subunit proteins by N- terminal and internal sequencing, and mass spectrometry. (PubMed id 8706699)1, 2 Vladimirov S.N.... Otto A. (1996)
    4. A cDNA sequence of human ribosomal protein, homologue of yeast S28. (PubMed id 8415000)1, 2 Hori N.... Matsubara K. (1993)
    5. A census of human soluble protein complexes. (PubMed id 22939629)1 Havugimana P.C....Emili A. (2012)
    6. Host cell interactome of HIV-1 Rev includes RNA helica ses involved in multiple facets of virus production. (PubMed id 22174317)1 Naji S....Gerace L. (2012)
    7. Methods for quantification of in vivo changes in prote in ubiquitination following proteasome and deubiquitinase inhibition. (PubMed id 22505724)1 Udeshi N.D....Carr S.A. (2012)
    8. A high-throughput approach for measuring temporal chan ges in the interactome. (PubMed id 22863883)1 Kristensen A.R....Foster L.J. (2012)
    9. Shotgun proteomics and network analysis of ubiquitin-r elated proteins from human breast carcinoma epithelial cells. (PubMed id 21853274)1 Zhou J....Liang S. (2012)
    10. Functional proteomics establishes the interaction of S IRT7 with chromatin remodeling complexes and expands its role in regulation of R NA polymerase I transcription. (PubMed id 22586326)1 Tsai Y.C....Cristea I.M. (2012)

    External Searches for RPS23 gene

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  
      Query String
    		PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    Genome Databases showing RPS23 gene

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 6228 HGNC: 10410 AceView: RPS23 Ensembl:ENSG00000186468 euGenes: HUgn6228
    ECgene: RPS23 Kegg: 6228 H-InvDB: RPS23

    Other Databases showing RPS23 gene

    (According to HUGE)
    About This Section
    		   --

    Specialized Databases showing RPS23 gene

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for RPS23 Pharmacogenomics, SNPs, Pathways

    Intellectual Property
    for RPS23 gene

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    		Patent Information for RPS23 gene:
    Search GeneIP for patents involving RPS23

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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