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Aliases for RPS21P3 Gene

Aliases for RPS21P3 Gene

  • Ribosomal Protein S21 Pseudogene 3 2 3
  • RPS21_2_494 3
  • AC098818.1 5

External Ids for RPS21P3 Gene

Previous GeneCards Identifiers for RPS21P3 Gene

  • GC04P079909
  • GC04P079690

Summaries for RPS21P3 Gene

GeneCards Summary for RPS21P3 Gene

RPS21P3 (Ribosomal Protein S21 Pseudogene 3) is a Pseudogene.

Additional gene information for RPS21P3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS21P3 Gene

Genomics for RPS21P3 Gene

Regulatory Elements for RPS21P3 Gene

Enhancers for RPS21P3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04H078691 2 FANTOM5 Ensembl ENCODE dbSUPER 11.6 -75.3 -75344 4 HDGF PKNOX1 ARNT ZNF766 CBX5 FOS REST SMARCB1 ZNF592 MEF2D BMP2K LINC00989 SERBP1P5 OR7E94P ENSG00000200998 RPS21P3 CNOT6L GC04P078707 HIGD1AP13
GH04H078621 1.9 FANTOM5 Ensembl ENCODE dbSUPER 11.4 -141.8 -141762 10.5 HDGF PKNOX1 FOXA2 ARNT YBX1 ZNF766 FOS JUNB REST SMARCB1 BMP2K CNOT6L RPS21P3 LINC01094 LINC01088 GC04M078633 ENSG00000200998 ANXA3
GH04H078644 1.7 FANTOM5 Ensembl ENCODE dbSUPER 11.7 -122.6 -122596 2.7 HDAC1 HDGF TBP ATF1 NFRKB BATF RAD21 RFX5 ZNF143 RCOR1 BMP2K RPS21P3 LINC01094 ENSG00000200998 GC04M078633
GH04H078649 1.5 Ensembl ENCODE dbSUPER 11.6 -117.6 -117649 2.4 PKNOX1 ARNT TCF12 ZNF766 GATA2 FOS ATF7 NCOA1 ZNF592 MAFF BMP2K RPS21P3 LINC01094 HIGD1AP13 GC04P078707
GH04H078704 1.4 Ensembl ENCODE dbSUPER 12 -63.1 -63103 2.3 FOXA2 ZNF493 ZFP64 ZEB1 ZNF121 ZNF138 ZNF354C FOS ATF7 ZNF202 CNOT6L BMP2K RPS21P3 ENSG00000200998 LINC01094 GC04P078707 HIGD1AP13
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS21P3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS21P3 Gene

Genomic Locations for RPS21P3 Gene
chr4:78,768,449-78,768,812
(GRCh38/hg38)
Size:
364 bases
Orientation:
Plus strand
chr4:79,689,603-79,689,966
(GRCh37/hg19)

Genomic View for RPS21P3 Gene

Genes around RPS21P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS21P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS21P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS21P3 Gene

Proteins for RPS21P3 Gene

Post-translational modifications for RPS21P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS21P3 Gene

Domains & Families for RPS21P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS21P3 Gene

Function for RPS21P3 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS21P3 Gene

Localization for RPS21P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS21P3 Gene

Pathways & Interactions for RPS21P3 Gene

SuperPathways for RPS21P3 Gene

No Data Available

Interacting Proteins for RPS21P3 Gene

Gene Ontology (GO) - Biological Process for RPS21P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS21P3 Gene

Drugs & Compounds for RPS21P3 Gene

No Compound Related Data Available

Transcripts for RPS21P3 Gene

mRNA/cDNA for RPS21P3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS21P3 Gene

No ASD Table

Relevant External Links for RPS21P3 Gene

GeneLoc Exon Structure for
RPS21P3
ECgene alternative splicing isoforms for
RPS21P3

Expression for RPS21P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS21P3 Gene

mRNA differential expression in normal tissues according to GTEx for RPS21P3 Gene

This gene is overexpressed in Testis (x20.3), Brain - Hypothalamus (x5.0), and Brain - Spinal cord (cervical c-1) (x4.8).

NURSA nuclear receptor signaling pathways regulating expression of RPS21P3 Gene:

RPS21P3
genes like me logo Genes that share expression patterns with RPS21P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS21P3 Gene

Orthologs for RPS21P3 Gene

Evolution for RPS21P3 Gene

ENSEMBL:
Gene Tree for RPS21P3 (if available)
TreeFam:
Gene Tree for RPS21P3 (if available)

No data available for Orthologs for RPS21P3 Gene

Paralogs for RPS21P3 Gene

No data available for Paralogs for RPS21P3 Gene

Variants for RPS21P3 Gene

Relevant External Links for RPS21P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS21P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS21P3 Gene

Disorders for RPS21P3 Gene

No disorders were found for RPS21P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS21P3 Gene

Publications for RPS21P3 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPS21P3 Gene

Sources for RPS21P3 Gene

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