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Aliases for RPS21P1 Gene

Aliases for RPS21P1 Gene

  • Ribosomal Protein S21 Pseudogene 1 2 3 5
  • RPS21_1_179 3

External Ids for RPS21P1 Gene

Previous GeneCards Identifiers for RPS21P1 Gene

  • GC01U902282
  • GC01P235597

Summaries for RPS21P1 Gene

GeneCards Summary for RPS21P1 Gene

RPS21P1 (Ribosomal Protein S21 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS21P1 Gene

Genomics for RPS21P1 Gene

Regulatory Elements for RPS21P1 Gene

Enhancers for RPS21P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F235929 1.3 FANTOM5 Ensembl ENCODE 111 +507.0 506954 21.4 HDGF PKNOX1 ARNT CREB3L1 ZFP64 SIN3A FEZF1 DMAP1 YBX1 ZNF2 ENSG00000273058 ENSG00000230325 RPS21P1 HEATR1 MTR LYST TBCE LDHAP2 LOC100130485 RPSAP21
GH01F235126 0.2 ENCODE 74.2 -304.0 -303963 4.6 HDGF PKNOX1 ARNT CREB3L1 MLX WRNIP1 ARID4B SIN3A FEZF1 DMAP1 RPS21P1 IRF2BP2 LDHAP2 GGPS1 TBCE LYST TARBP1 RBM34 ARID4B TOMM20
GH01F235916 1.3 FANTOM5 Ensembl ENCODE 67.2 +487.5 487529 8.7 HDGF PKNOX1 SIN3A FEZF1 ZNF2 ZNF302 ZNF416 ZNF548 FOS ZNF263 ENSG00000273058 ENSG00000230325 RPS21P1 HEATR1 MTR LYST LOC100130485 RPSAP21 RNU5E-2P TBCE
GH01F234714 0.6 FANTOM5 ENCODE 57.9 -711.4 -711354 14.7 CREB3L1 MLX FEZF1 DMAP1 YBX1 YY1 SLC30A9 ZNF143 ZNF548 ZNF263 RPS21P1 IRF2BP2 LOC102724100 LOC105373206 ENSG00000282097 TBCE ENSG00000230404 ENSG00000228830 TOMM20 GGPS1
GH01F234527 1.2 FANTOM5 Ensembl ENCODE 55.9 -895.5 -895455 20.2 CREB3L1 ZFP64 DMAP1 FEZF1 YBX1 YY1 ZNF143 ZNF548 ZNF263 SP3 RPS21P1 IRF2BP2 TBCE LINC01354 ENSG00000212144 B3GALNT2 GGPS1 GC01M234541
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPS21P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS21P1 Gene

Chromosome:
1
Start:
235,432,947 bp from pter
End:
235,433,232 bp from pter
Size:
286 bases
Orientation:
Plus strand

Genomic View for RPS21P1 Gene

Genes around RPS21P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS21P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS21P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS21P1 Gene

Proteins for RPS21P1 Gene

Post-translational modifications for RPS21P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS21P1 Gene

Domains & Families for RPS21P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS21P1 Gene

Function for RPS21P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS21P1 Gene

Localization for RPS21P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS21P1 Gene

Pathways & Interactions for RPS21P1 Gene

SuperPathways for RPS21P1 Gene

No Data Available

Interacting Proteins for RPS21P1 Gene

Gene Ontology (GO) - Biological Process for RPS21P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS21P1 Gene

Transcripts for RPS21P1 Gene

mRNA/cDNA for RPS21P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS21P1 Gene

No ASD Table

Relevant External Links for RPS21P1 Gene

GeneLoc Exon Structure for
RPS21P1
ECgene alternative splicing isoforms for
RPS21P1

Expression for RPS21P1 Gene

mRNA expression in normal human tissues for RPS21P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS21P1 Gene:

RPS21P1
genes like me logo Genes that share expression patterns with RPS21P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS21P1 Gene

Orthologs for RPS21P1 Gene

Evolution for RPS21P1 Gene

ENSEMBL:
Gene Tree for RPS21P1 (if available)
TreeFam:
Gene Tree for RPS21P1 (if available)

No data available for Orthologs for RPS21P1 Gene

Paralogs for RPS21P1 Gene

No data available for Paralogs for RPS21P1 Gene

Variants for RPS21P1 Gene

Relevant External Links for RPS21P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS21P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS21P1 Gene

Disorders for RPS21P1 Gene

No disorders were found for RPS21P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS21P1 Gene

Publications for RPS21P1 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS21P1 Gene

Sources for RPS21P1 Gene

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