Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPS20P4 Gene

Aliases for RPS20P4 Gene

  • Ribosomal Protein S20 Pseudogene 4 2 3 5
  • Ribosomal Protein S20B (Gene Or Pseudogene) 2 3
  • RPS20_6_627 3
  • RPS20B 3

External Ids for RPS20P4 Gene

Previous HGNC Symbols for RPS20P4 Gene

  • RPS20B

Previous GeneCards Identifiers for RPS20P4 Gene

  • GC05U990050
  • GC05M149429
  • GC05M149381
  • GC05M149403

Summaries for RPS20P4 Gene

GeneCards Summary for RPS20P4 Gene

RPS20P4 (Ribosomal Protein S20 Pseudogene 4) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS20P4 Gene

Genomics for RPS20P4 Gene

Regulatory Elements for RPS20P4 Gene

Enhancers for RPS20P4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05G149209 1.7 FANTOM5 Ensembl ENCODE dbSUPER 20.2 +808.2 808214 8.5 ZNF493 ZFP64 BMI1 GATA2 ZNF354C RCOR1 FOS ZNF263 ZNF654 ZNF680 AFAP1L1 HMGXB3 RPS20P4 RPL7P1 LOC102546294 TIGD6 ENSG00000248647 ENSG00000253406 ABLIM3 GC05M149047
GH05G150176 1.6 Ensembl ENCODE dbSUPER 20.3 -161.0 -161005 12.8 HDGF ARNT ZFP64 ZNF2 YY1 FOS JUNB REST TBX21 ZNF592 ZNF300 ZNF300P1 HMGXB3 RPL7P1 RPS20P4 RPS14 PDGFRB SLC6A7 TIGD6 SMIM3
GH05G149999 1.8 FANTOM5 ENCODE dbSUPER 13.1 +21.0 20983 3.5 CREB3L1 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC TIGD6 ZNF300P1 RPS20P4 HMGXB3 CAMK2A
GH05G149956 2 FANTOM5 Ensembl ENCODE dbSUPER 11.7 +62.4 62404 6.7 HDGF PKNOX1 FOXA2 MLX CREB3L1 ZFP64 ARID4B SIN3A FEZF1 ZBTB7B HMGXB3 ZNF300 ZNF300P1 RPL7P1 TIGD6 SLC26A2 RPS20P4 RPS14 PDGFRB SMIM3
GH05G149449 2 FANTOM5 Ensembl ENCODE dbSUPER 11.6 +568.6 568586 8.5 MLX CREB3L1 ZFP64 YBX1 DMAP1 SLC30A9 MCM3 MEF2D SSRP1 GLIS1 RPS20P4 TIGD6 RPL7P1 HMGXB3 ARHGEF37 MIR145 ENSG00000230551
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS20P4 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS20P4 Gene

Chromosome:
5
Start:
150,021,527 bp from pter
End:
150,022,053 bp from pter
Size:
527 bases
Orientation:
Minus strand

Genomic View for RPS20P4 Gene

Genes around RPS20P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS20P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS20P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS20P4 Gene

Proteins for RPS20P4 Gene

Post-translational modifications for RPS20P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS20P4 Gene

Domains & Families for RPS20P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS20P4 Gene

Function for RPS20P4 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS20P4 Gene

Localization for RPS20P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS20P4 Gene

Pathways & Interactions for RPS20P4 Gene

SuperPathways for RPS20P4 Gene

No Data Available

Interacting Proteins for RPS20P4 Gene

Gene Ontology (GO) - Biological Process for RPS20P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS20P4 Gene

Drugs & Compounds for RPS20P4 Gene

No Compound Related Data Available

Transcripts for RPS20P4 Gene

mRNA/cDNA for RPS20P4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS20P4 Gene

No ASD Table

Relevant External Links for RPS20P4 Gene

GeneLoc Exon Structure for
RPS20P4
ECgene alternative splicing isoforms for
RPS20P4

Expression for RPS20P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS20P4 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS20P4 Gene:

RPS20P4
genes like me logo Genes that share expression patterns with RPS20P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS20P4 Gene

Orthologs for RPS20P4 Gene

Evolution for RPS20P4 Gene

ENSEMBL:
Gene Tree for RPS20P4 (if available)
TreeFam:
Gene Tree for RPS20P4 (if available)

No data available for Orthologs for RPS20P4 Gene

Paralogs for RPS20P4 Gene

No data available for Paralogs for RPS20P4 Gene

Variants for RPS20P4 Gene

Relevant External Links for RPS20P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS20P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS20P4 Gene

Disorders for RPS20P4 Gene

No disorders were found for RPS20P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS20P4 Gene

Publications for RPS20P4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Ribosomal protein gene sequences map to human chromosomes 5, 8, and 17. (PMID: 3459254) Nakamichi N.N. … Roufa D.J. (Somat. Cell Mol. Genet. 1986) 3 64

Products for RPS20P4 Gene

Sources for RPS20P4 Gene

Content
Loading form....