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Aliases for RPS20P35 Gene

Aliases for RPS20P35 Gene

  • Ribosomal Protein S20 Pseudogene 35 2 3 5
  • RPS20_18_1544 3

External Ids for RPS20P35 Gene

Previous GeneCards Identifiers for RPS20P35 Gene

  • GC17U901139
  • GC17P037012

Summaries for RPS20P35 Gene

GeneCards Summary for RPS20P35 Gene

RPS20P35 (Ribosomal Protein S20 Pseudogene 35) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS20P35 Gene

Genomics for RPS20P35 Gene

Regulatory Elements for RPS20P35 Gene

Enhancers for RPS20P35 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17F038876 0.9 Ensembl ENCODE 13 +27.0 26955 11.1 PKNOX1 ZFP64 SIN3A ARID4B FEZF1 GLI4 ETS1 ZNF121 GLIS2 SP5 RPL23 RPS20P35 SNORA21 ENSG00000252699 C17orf98 CWC25 PSMB3 LASP1 PCGF2 PPP1R1B
GH17F038895 1.1 Ensembl ENCODE 12.5 +44.2 44223 7.7 HDGF ATF1 ARNT ZFP64 ARID4B SIN3A YY1 ZNF121 GATA2 FOS SNORA21 MED1 ENSG00000266469 LASP1 ENSG00000275532 RPS20P35 ENSG00000252699 RPL23 ENSG00000275665 CWC25
GH17F038889 1 Ensembl ENCODE 12.2 +37.1 37104 5.0 PKNOX1 ZFP64 ZNF2 YY1 ZNF766 GATA2 ZNF143 DEK ZNF263 REST LASP1 RPL23 RPS20P35 SNORA21 ENSG00000252699 CWC25 PIP4K2B PSMB3 GC17M038893
GH17F038850 1.2 FANTOM5 ENCODE 6.6 -1.7 -1696 5.2 ARNT CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF143 RPL23 ENSG00000266469 CDK12 SNORA21 PCGF2 ERBB2 ENSG00000276170 ENSG00000275532 RPL19 MED1
GH17F038867 1.2 FANTOM5 ENCODE 4.9 +16.5 16510 9.2 CREB3L1 MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZNF548 ZNF263 SP3 CDK12 ENSG00000266469 MED1 ENSG00000275665 SNORA21 ENSG00000275532 CWC25 LINC02079 PSMB3 ENSG00000252699
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPS20P35 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS20P35 Gene

Chromosome:
17
Start:
38,855,194 bp from pter
End:
38,855,724 bp from pter
Size:
531 bases
Orientation:
Plus strand

Genomic View for RPS20P35 Gene

Genes around RPS20P35 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS20P35 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS20P35 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS20P35 Gene

Proteins for RPS20P35 Gene

Post-translational modifications for RPS20P35 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS20P35 Gene

Domains & Families for RPS20P35 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS20P35 Gene

Function for RPS20P35 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS20P35 Gene

Localization for RPS20P35 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS20P35 Gene

Pathways & Interactions for RPS20P35 Gene

SuperPathways for RPS20P35 Gene

No Data Available

Interacting Proteins for RPS20P35 Gene

Gene Ontology (GO) - Biological Process for RPS20P35 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS20P35 Gene

Transcripts for RPS20P35 Gene

mRNA/cDNA for RPS20P35 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS20P35 Gene

No ASD Table

Relevant External Links for RPS20P35 Gene

GeneLoc Exon Structure for
RPS20P35
ECgene alternative splicing isoforms for
RPS20P35

Expression for RPS20P35 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS20P35 Gene

mRNA differential expression in normal tissues according to GTEx for RPS20P35 Gene

This gene is overexpressed in Testis (x14.6).

NURSA nuclear receptor signaling pathways regulating expression of RPS20P35 Gene:

RPS20P35
genes like me logo Genes that share expression patterns with RPS20P35: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS20P35 Gene

Orthologs for RPS20P35 Gene

Evolution for RPS20P35 Gene

ENSEMBL:
Gene Tree for RPS20P35 (if available)
TreeFam:
Gene Tree for RPS20P35 (if available)

No data available for Orthologs for RPS20P35 Gene

Paralogs for RPS20P35 Gene

No data available for Paralogs for RPS20P35 Gene

Variants for RPS20P35 Gene

Relevant External Links for RPS20P35 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS20P35

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS20P35 Gene

Disorders for RPS20P35 Gene

No disorders were found for RPS20P35 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS20P35 Gene

Publications for RPS20P35 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS20P35 Gene

Sources for RPS20P35 Gene

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