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Aliases for RPS20P35 Gene

Aliases for RPS20P35 Gene

  • Ribosomal Protein S20 Pseudogene 35 2 3 5
  • RPS20_18_1544 3

External Ids for RPS20P35 Gene

Previous GeneCards Identifiers for RPS20P35 Gene

  • GC17U901139
  • GC17P037012

Summaries for RPS20P35 Gene

GeneCards Summary for RPS20P35 Gene

RPS20P35 (Ribosomal Protein S20 Pseudogene 35) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS20P35 Gene

Genomics for RPS20P35 Gene

Regulatory Elements for RPS20P35 Gene

Enhancers for RPS20P35 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17G038876 1.5 Ensembl ENCODE dbSUPER 13 +27.0 26955 11.1 PKNOX1 ARNT ZFP64 SIN3A ARID4B FEZF1 YY1 SP5 MXD4 NFYC ENSG00000275532 LOC100287808 RPL23 RPS20P35 SNORA21 ENSG00000252699 C17orf98 CWC25 PSMB3 MED1
GH17G038895 1.5 Ensembl ENCODE dbSUPER 12.5 +44.2 44223 7.7 HDGF PKNOX1 ATF1 ARNT ZFP64 ARID4B SIN3A YY1 TCF12 ZNF121 LASP1 RPS20P35 SNORA21 ENSG00000252699 RPL23 MED1 CWC25 ENSG00000266469 LINC00672 ENSG00000266588
GH17G038889 1.5 Ensembl ENCODE dbSUPER 12.2 +37.1 37104 5.0 PKNOX1 ZFP64 ZNF2 YY1 TCF12 ZNF766 GATA2 ZNF143 DEK ZNF263 LASP1 RPL23 RPS20P35 SNORA21 ENSG00000252699 CWC25 PIP4K2B PSMB3 GC17M038893
GH17G038850 1.5 FANTOM5 ENCODE 6.6 -1.7 -1696 5.2 CREB3L1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC TBX21 GLIS1 CDK12 SNORA21 ENSG00000266469 PCGF2 RPL19 RPS20P35 LASP1 PSMB3 C17orf98 PIP4K2B
GH17G038867 1.8 FANTOM5 ENCODE dbSUPER 5 +16.5 16510 9.2 MLX CREB3L1 ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZNF548 ZNF263 SP3 ENSG00000266469 MED1 CDK12 ENSG00000275665 SNORA21 ENSG00000275532 CWC25 PSMB3 ENSG00000252699 C17orf98
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS20P35 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS20P35 Gene

Chromosome:
17
Start:
38,855,194 bp from pter
End:
38,855,724 bp from pter
Size:
531 bases
Orientation:
Plus strand

Genomic View for RPS20P35 Gene

Genes around RPS20P35 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS20P35 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS20P35 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS20P35 Gene

Proteins for RPS20P35 Gene

Post-translational modifications for RPS20P35 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS20P35 Gene

Domains & Families for RPS20P35 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS20P35 Gene

Function for RPS20P35 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS20P35 Gene

Localization for RPS20P35 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS20P35 Gene

Pathways & Interactions for RPS20P35 Gene

SuperPathways for RPS20P35 Gene

No Data Available

Interacting Proteins for RPS20P35 Gene

Gene Ontology (GO) - Biological Process for RPS20P35 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS20P35 Gene

Drugs & Compounds for RPS20P35 Gene

No Compound Related Data Available

Transcripts for RPS20P35 Gene

mRNA/cDNA for RPS20P35 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS20P35 Gene

No ASD Table

Relevant External Links for RPS20P35 Gene

GeneLoc Exon Structure for
RPS20P35
ECgene alternative splicing isoforms for
RPS20P35

Expression for RPS20P35 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS20P35 Gene

mRNA differential expression in normal tissues according to GTEx for RPS20P35 Gene

This gene is overexpressed in Testis (x14.6).

NURSA nuclear receptor signaling pathways regulating expression of RPS20P35 Gene:

RPS20P35
genes like me logo Genes that share expression patterns with RPS20P35: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS20P35 Gene

Orthologs for RPS20P35 Gene

Evolution for RPS20P35 Gene

ENSEMBL:
Gene Tree for RPS20P35 (if available)
TreeFam:
Gene Tree for RPS20P35 (if available)

No data available for Orthologs for RPS20P35 Gene

Paralogs for RPS20P35 Gene

No data available for Paralogs for RPS20P35 Gene

Variants for RPS20P35 Gene

Relevant External Links for RPS20P35 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS20P35

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS20P35 Gene

Disorders for RPS20P35 Gene

No disorders were found for RPS20P35 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS20P35 Gene

Publications for RPS20P35 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS20P35 Gene

Sources for RPS20P35 Gene

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