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Aliases for RPS20P31 Gene

Subcategory (RNA class) for RPS20P31 Gene

antisense

Aliases for RPS20P31 Gene

  • Ribosomal Protein S20 Pseudogene 31 2 3 5
  • RPS20_15_1287 3

External Ids for RPS20P31 Gene

ORGUL Members for RPS20P31 Gene

Previous GeneCards Identifiers for RPS20P31 Gene

  • GC12U901090
  • GC12P120686

Summaries for RPS20P31 Gene

GeneCards Summary for RPS20P31 Gene

RPS20P31 (Ribosomal Protein S20 Pseudogene 31) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS20P31 Gene

Genomics for RPS20P31 Gene

Regulatory Elements for RPS20P31 Gene

Enhancers for RPS20P31 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12G120239 2.1 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +2.1 2071 19.3 CREB3L1 ZFP64 DMAP1 YBX1 FEZF1 YY1 SLC30A9 ZNF143 ZNF263 SP3 GCN1 SIRT4 RNU4-1 RNU4-2 RNU6-1088P PLA2G1B PXN BICDL1 RNF10 RAB35
GH12G120223 2.1 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -15.9 -15876 16.0 MLX FEZF1 DMAP1 YBX1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC PXN SIRT4 RPLP0 RNU4-1 RNU4-2 PXN-AS1 PLA2G1B GCN1 RAB35 MSI1
GH12G120261 1.6 FANTOM5 ENCODE dbSUPER 0.4 +16.5 16470 5.2 PKNOX1 MLX ZFP64 ARID4B SIN3A FEZF1 ZNF766 ZNF143 FOS KLF13 GCN1 PRKAB1 RPL31P52 PXN SIRT4 RPLP0 MSI1 RAB35 RPS20P31
GH12G120259 1 Ensembl ENCODE dbSUPER 0.4 +12.4 12449 1.0 HLF SCRT2 HMBOX1 ZBTB33 PXN RPS20P31
GH12G120260 0.7 ENCODE dbSUPER 0.4 +13.3 13313 0.2 ZNF600 FOS PXN RPS20P31
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS20P31 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS20P31 Gene

Chromosome:
12
Start:
120,247,460 bp from pter
End:
120,247,791 bp from pter
Size:
332 bases
Orientation:
Plus strand

Genomic View for RPS20P31 Gene

Genes around RPS20P31 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS20P31 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS20P31 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS20P31 Gene

Proteins for RPS20P31 Gene

Post-translational modifications for RPS20P31 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS20P31 Gene

Domains & Families for RPS20P31 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS20P31 Gene

Function for RPS20P31 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS20P31 Gene

Localization for RPS20P31 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS20P31 Gene

Pathways & Interactions for RPS20P31 Gene

SuperPathways for RPS20P31 Gene

No Data Available

Interacting Proteins for RPS20P31 Gene

Gene Ontology (GO) - Biological Process for RPS20P31 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS20P31 Gene

Drugs & Compounds for RPS20P31 Gene

No Compound Related Data Available

Transcripts for RPS20P31 Gene

mRNA/cDNA for RPS20P31 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS20P31 Gene

No ASD Table

Relevant External Links for RPS20P31 Gene

GeneLoc Exon Structure for
RPS20P31
ECgene alternative splicing isoforms for
RPS20P31

Expression for RPS20P31 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS20P31 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS20P31 Gene:

RPS20P31
genes like me logo Genes that share expression patterns with RPS20P31: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS20P31 Gene

Orthologs for RPS20P31 Gene

Evolution for RPS20P31 Gene

ENSEMBL:
Gene Tree for RPS20P31 (if available)
TreeFam:
Gene Tree for RPS20P31 (if available)

No data available for Orthologs for RPS20P31 Gene

Paralogs for RPS20P31 Gene

No data available for Paralogs for RPS20P31 Gene

Variants for RPS20P31 Gene

Relevant External Links for RPS20P31 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS20P31

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS20P31 Gene

Disorders for RPS20P31 Gene

No disorders were found for RPS20P31 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS20P31 Gene

Publications for RPS20P31 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS20P31 Gene

Sources for RPS20P31 Gene

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