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Aliases for RPS20P28 Gene

Subcategory (RNA class) for RPS20P28 Gene


Aliases for RPS20P28 Gene

  • Ribosomal Protein S20 Pseudogene 28 2 3
  • RPS20_13_1202 3
  • RP11-69M1.1 5

External Ids for RPS20P28 Gene

ORGUL Members for RPS20P28 Gene

Previous GeneCards Identifiers for RPS20P28 Gene

  • GC12U901117
  • GC12M008148
  • GC12M008149

Summaries for RPS20P28 Gene

GeneCards Summary for RPS20P28 Gene

RPS20P28 (Ribosomal Protein S20 Pseudogene 28) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS20P28 Gene

Genomics for RPS20P28 Gene

Regulatory Elements for RPS20P28 Gene

Enhancers for RPS20P28 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12F007993 1.5 FANTOM5 Ensembl ENCODE 0.8 +0.1 138 3.5 HDGF HDAC1 PKNOX1 SIN3A BMI1 THRB ZNF2 RAD21 ZBTB40 RFX5 FOXJ2 DPPA3 HSPD1P12 RIMKLB RPS20P28 ENSG00000206636
GH12F007988 1.1 Ensembl ENCODE 0.8 +4.7 4748 3.5 HDGF TBP HDAC1 GATA2 ELK4 MEF2D KLF16 SMARCA4 IKZF1 HMBOX1 FOXJ2 HSPD1P12 POU5F1P3 RPS20P28 ENSG00000206636
GH12F007986 1 Ensembl ENCODE 0.4 +8.3 8266 1.4 HDAC1 KLF1 KLF17 CEBPG GATA3 CTBP1 POLR3A TCF7L2 RFX1 STAT1 FOXJ2 HSPD1P12 NECAP1 RPS20P28 ENSG00000206636
GH12F007982 0.7 ENCODE 0.4 +12.6 12635 0.2 SOX13 SAP130 TEAD4 ARID4B SIN3A TEAD3 RCOR1 CREM TCF7L2 SOX5 ENSG00000206636 RPS20P28
GH12F007976 0.9 Ensembl ENCODE 0.3 +17.4 17422 2.1 HDGF RFX1 MTA2 IKZF1 NBN MLLT1 TBX21 SPI1 ENSG00000206636 RPS20P28
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS20P28 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS20P28 Gene

7,994,770 bp from pter
7,995,084 bp from pter
315 bases
Minus strand

Genomic View for RPS20P28 Gene

Genes around RPS20P28 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS20P28 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS20P28 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS20P28 Gene

Proteins for RPS20P28 Gene

Post-translational modifications for RPS20P28 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS20P28 Gene

Domains & Families for RPS20P28 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS20P28 Gene

Function for RPS20P28 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS20P28 Gene

Localization for RPS20P28 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS20P28 Gene

Pathways & Interactions for RPS20P28 Gene

SuperPathways for RPS20P28 Gene

No Data Available

Interacting Proteins for RPS20P28 Gene

Gene Ontology (GO) - Biological Process for RPS20P28 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPS20P28 Gene

Transcripts for RPS20P28 Gene

mRNA/cDNA for RPS20P28 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS20P28 Gene

No ASD Table

Relevant External Links for RPS20P28 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPS20P28 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS20P28 Gene

mRNA differential expression in normal tissues according to GTEx for RPS20P28 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x9.6) and Brain - Cerebellum (x8.8).

NURSA nuclear receptor signaling pathways regulating expression of RPS20P28 Gene:

genes like me logo Genes that share expression patterns with RPS20P28: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS20P28 Gene

Orthologs for RPS20P28 Gene

Evolution for RPS20P28 Gene

Gene Tree for RPS20P28 (if available)
Gene Tree for RPS20P28 (if available)

No data available for Orthologs for RPS20P28 Gene

Paralogs for RPS20P28 Gene

No data available for Paralogs for RPS20P28 Gene

Variants for RPS20P28 Gene

Relevant External Links for RPS20P28 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS20P28 Gene

Disorders for RPS20P28 Gene

No disorders were found for RPS20P28 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS20P28 Gene

Publications for RPS20P28 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS20P28 Gene

Sources for RPS20P28 Gene

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