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Aliases for RPS20P26 Gene

Aliases for RPS20P26 Gene

  • Ribosomal Protein S20 Pseudogene 26 2 3
  • RPS20_11_1143 3
  • RP11-390K5.1 5

External Ids for RPS20P26 Gene

Previous GeneCards Identifiers for RPS20P26 Gene

  • GC11U901265
  • GC11M047213
  • GC11M047305
  • GC11M048071
  • GC11M048797
  • GC11M049900
  • GC11M047311
  • GC11M047940
  • GC11M050792
  • GC11M051587
  • GC11M052249

Summaries for RPS20P26 Gene

GeneCards Summary for RPS20P26 Gene

RPS20P26 (Ribosomal Protein S20 Pseudogene 26) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS20P26 Gene

Genomics for RPS20P26 Gene

Regulatory Elements for RPS20P26 Gene

Enhancers for RPS20P26 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G047232 1.2 Ensembl ENCODE 12.6 -42.6 -42643 2.9 ELF3 SREBF2 SIN3A ARID4B DMAP1 THRB RAD21 YY1 RARA ZNF335 ACP2 RPS20P26 PACSIN3 MADD LOC101928943 ARFGAP2 MYBPC3 ENSG00000256897 NR1H3
GH11G047225 0.5 Ensembl 12 -34.2 -34245 0.6 ZNF664 ZNF146 NBN TBX21 ACP2 RPS20P26 PACSIN3 NR1H3 MADD LOC101928943 ARFGAP2 SLC39A13 ENSG00000256897
GH11G047193 1.6 Ensembl ENCODE dbSUPER 0.7 -2.6 -2550 2.2 HDGF PKNOX1 FOXA2 CREB3L1 ARID4B SIN3A DMAP1 YY1 ZNF143 ZNF207 RPS20P26 GC11P047205
GH11G047191 0.9 ENCODE 0.7 -0.4 -405 1.4 PKNOX1 SIN3A DNMT3B ZNF48 YY1 RARA ZNF335 EGR1 CREM ZHX1 ENSG00000271350 LRP4 RPS20P26 GC11P047205
GH11G047204 1.3 Ensembl ENCODE dbSUPER 0.4 -13.2 -13159 1.2 HDAC1 ZNF146 ZNF384 BMI1 ZNF664 FOSL1 GATA3 GATA2 FOSL2 FOS PACSIN3 LRP4 MYBPC3 GC11P047205 RPS20P26
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS20P26 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS20P26 Gene

Chromosome:
11
Start:
47,191,146 bp from pter
End:
47,191,656 bp from pter
Size:
511 bases
Orientation:
Minus strand

Genomic View for RPS20P26 Gene

Genes around RPS20P26 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS20P26 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS20P26 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS20P26 Gene

Proteins for RPS20P26 Gene

Post-translational modifications for RPS20P26 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS20P26 Gene

Domains & Families for RPS20P26 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS20P26 Gene

Function for RPS20P26 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS20P26 Gene

Localization for RPS20P26 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS20P26 Gene

Pathways & Interactions for RPS20P26 Gene

SuperPathways for RPS20P26 Gene

No Data Available

Interacting Proteins for RPS20P26 Gene

Gene Ontology (GO) - Biological Process for RPS20P26 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS20P26 Gene

Drugs & Compounds for RPS20P26 Gene

No Compound Related Data Available

Transcripts for RPS20P26 Gene

mRNA/cDNA for RPS20P26 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS20P26 Gene

No ASD Table

Relevant External Links for RPS20P26 Gene

GeneLoc Exon Structure for
RPS20P26
ECgene alternative splicing isoforms for
RPS20P26

Expression for RPS20P26 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS20P26 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS20P26 Gene:

RPS20P26
genes like me logo Genes that share expression patterns with RPS20P26: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS20P26 Gene

Orthologs for RPS20P26 Gene

Evolution for RPS20P26 Gene

ENSEMBL:
Gene Tree for RPS20P26 (if available)
TreeFam:
Gene Tree for RPS20P26 (if available)

No data available for Orthologs for RPS20P26 Gene

Paralogs for RPS20P26 Gene

No data available for Paralogs for RPS20P26 Gene

Variants for RPS20P26 Gene

Relevant External Links for RPS20P26 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS20P26

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS20P26 Gene

Disorders for RPS20P26 Gene

No disorders were found for RPS20P26 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS20P26 Gene

Publications for RPS20P26 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS20P26 Gene

Sources for RPS20P26 Gene

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