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Aliases for RPS20P25 Gene

Subcategory (RNA class) for RPS20P25 Gene


Aliases for RPS20P25 Gene

  • Ribosomal Protein S20 Pseudogene 25 2 3 5
  • RPS20_13_989 3

External Ids for RPS20P25 Gene

ORGUL Members for RPS20P25 Gene

Previous GeneCards Identifiers for RPS20P25 Gene

  • GC09U901241
  • GC09P084026

Summaries for RPS20P25 Gene

GeneCards Summary for RPS20P25 Gene

RPS20P25 (Ribosomal Protein S20 Pseudogene 25) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS20P25 Gene

Genomics for RPS20P25 Gene

Regulatory Elements for RPS20P25 Gene

Enhancers for RPS20P25 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F081394 2.4 VISTA ENCODE 0.3 -15.3 -15261 1.9 PKNOX1 INSM2 KLF17 FEZF1 RAD21 ZNF2 YY1 ZNF121 ZNF366 ZNF391 GC09P081394 RPS20P25
GH09F081409 0.8 Ensembl ENCODE 0.8 +0.1 139 1.3 GATA3 CTBP1 DPF2 FOS FOSL2 RAD21 MAFK RPS20P25 GC09P081455
GH09F081416 0.7 Ensembl ENCODE 0.4 +6.7 6744 1.7 GATA3 TRIM28 RPS20P25 GC09P081455
GH09F081396 0.6 ENCODE 0.4 -13.6 -13639 0.2 OSR2 E2F1 GATA3 ATF3 WT1 TCF7L2 GC09P081394 RPS20P25
GH09F081430 0.8 Ensembl ENCODE 0.3 +21.4 21420 1.9 FOS ZIC2 MAFK NR2F2 NFE2L2 GC09P081455 RPS20P25
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS20P25 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS20P25 Gene

81,410,279 bp from pter
81,410,633 bp from pter
355 bases
Plus strand

Genomic View for RPS20P25 Gene

Genes around RPS20P25 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS20P25 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS20P25 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS20P25 Gene

Proteins for RPS20P25 Gene

Post-translational modifications for RPS20P25 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS20P25 Gene

Domains & Families for RPS20P25 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS20P25 Gene

Function for RPS20P25 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS20P25 Gene

Localization for RPS20P25 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS20P25 Gene

Pathways & Interactions for RPS20P25 Gene

SuperPathways for RPS20P25 Gene

No Data Available

Interacting Proteins for RPS20P25 Gene

Gene Ontology (GO) - Biological Process for RPS20P25 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPS20P25 Gene

Transcripts for RPS20P25 Gene

mRNA/cDNA for RPS20P25 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS20P25 Gene

No ASD Table

Relevant External Links for RPS20P25 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPS20P25 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS20P25 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS20P25 Gene:

genes like me logo Genes that share expression patterns with RPS20P25: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS20P25 Gene

Orthologs for RPS20P25 Gene

Evolution for RPS20P25 Gene

Gene Tree for RPS20P25 (if available)
Gene Tree for RPS20P25 (if available)

No data available for Orthologs for RPS20P25 Gene

Paralogs for RPS20P25 Gene

No data available for Paralogs for RPS20P25 Gene

Variants for RPS20P25 Gene

Relevant External Links for RPS20P25 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS20P25 Gene

Disorders for RPS20P25 Gene

Relevant External Links for RPS20P25

Genetic Association Database (GAD)

No disorders were found for RPS20P25 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS20P25 Gene

Publications for RPS20P25 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association with select biomarker traits in the Framingham Heart Study. (PMID: 17903293) Benjamin E.J. … Vasan R.S. (BMC Med. Genet. 2007) 46 64
  3. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel D.P. … Karasik D. (BMC Med. Genet. 2007) 46 64

Products for RPS20P25 Gene

Sources for RPS20P25 Gene

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