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Aliases for RPS20P22 Gene

Subcategory (RNA class) for RPS20P22 Gene

lncRNA

Aliases for RPS20P22 Gene

  • Ribosomal Protein S20 Pseudogene 22 2 3 5
  • RPS20_8_895 3

External Ids for RPS20P22 Gene

ORGUL Members for RPS20P22 Gene

Previous GeneCards Identifiers for RPS20P22 Gene

  • GC08U901142
  • GC08M038292

Summaries for RPS20P22 Gene

GeneCards Summary for RPS20P22 Gene

RPS20P22 (Ribosomal Protein S20 Pseudogene 22) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS20P22 Gene

Genomics for RPS20P22 Gene

Regulatory Elements for RPS20P22 Gene

Enhancers for RPS20P22 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08G037840 1.6 Ensembl ENCODE dbSUPER 26.6 +592.8 592780 4.0 ARNT AGO1 ARID4B DMAP1 FEZF1 ZNF2 ZNF302 ZNF548 DEK ZNF263 DDHD2 ENSG00000255201 RPS20P22 ADGRA2 LOC102723716 RAB11FIP1 GOT1L1 RNU6-323P LOC728024 GC08P037836
GH08G037693 1.6 Ensembl ENCODE dbSUPER 26.6 +738.1 738095 7.9 HDGF PKNOX1 FOXA2 ARNT SIN3A ARID4B DMAP1 FEZF1 ZNF2 YY1 ENSG00000255201 DDHD2 RPS20P22 LOC102723716 LOC728024 ZNF703 LOC101929622
GH08G038379 1.8 FANTOM5 ENCODE dbSUPER 18 +52.1 52132 8.1 CREB3L1 DMAP1 YY1 SLC30A9 ZNF143 ZNF548 ZNF263 SP3 NFYC TBX21 DDHD2 RPS20P22 LETM2 LOC102723716 ENSG00000255201 TACC1 NSD3 ENSG00000272092
GH08G037603 1.5 Ensembl ENCODE dbSUPER 17.8 +831.2 831161 1.2 PKNOX1 FOXA2 ATF1 MLX ZNF493 ZNF133 ARID4B DMAP1 ZNF2 ZNF48 DDHD2 LOC102723716 ENSG00000255201 RPS20P22 LOC105379379 LINC01605 ZNF703 ENSG00000253388 ENSG00000254290 ENSG00000254306
GH08G038170 1.4 ENCODE dbSUPER 17.9 +262.8 262819 3.8 HDGF PKNOX1 CREB3L1 ARNT ARID4B SIN3A DMAP1 FEZF1 ZNF2 SLC30A9 RPS20P22 DDHD2 LOC102723716 LETM2 BAG4 RNU6-323P GC08M038168
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS20P22 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS20P22 Gene

Chromosome:
8
Start:
38,434,337 bp from pter
End:
38,435,664 bp from pter
Size:
1,328 bases
Orientation:
Minus strand

Genomic View for RPS20P22 Gene

Genes around RPS20P22 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS20P22 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS20P22 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS20P22 Gene

Proteins for RPS20P22 Gene

Post-translational modifications for RPS20P22 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS20P22 Gene

Domains & Families for RPS20P22 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS20P22 Gene

Function for RPS20P22 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS20P22 Gene

Localization for RPS20P22 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS20P22 Gene

Pathways & Interactions for RPS20P22 Gene

SuperPathways for RPS20P22 Gene

No Data Available

Interacting Proteins for RPS20P22 Gene

Gene Ontology (GO) - Biological Process for RPS20P22 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS20P22 Gene

Drugs & Compounds for RPS20P22 Gene

No Compound Related Data Available

Transcripts for RPS20P22 Gene

mRNA/cDNA for RPS20P22 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS20P22 Gene

No ASD Table

Relevant External Links for RPS20P22 Gene

GeneLoc Exon Structure for
RPS20P22
ECgene alternative splicing isoforms for
RPS20P22

Expression for RPS20P22 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS20P22 Gene

mRNA differential expression in normal tissues according to GTEx for RPS20P22 Gene

This gene is overexpressed in Pancreas (x4.4).

NURSA nuclear receptor signaling pathways regulating expression of RPS20P22 Gene:

RPS20P22
genes like me logo Genes that share expression patterns with RPS20P22: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS20P22 Gene

Orthologs for RPS20P22 Gene

Evolution for RPS20P22 Gene

ENSEMBL:
Gene Tree for RPS20P22 (if available)
TreeFam:
Gene Tree for RPS20P22 (if available)

No data available for Orthologs for RPS20P22 Gene

Paralogs for RPS20P22 Gene

No data available for Paralogs for RPS20P22 Gene

Variants for RPS20P22 Gene

Relevant External Links for RPS20P22 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS20P22

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS20P22 Gene

Disorders for RPS20P22 Gene

Relevant External Links for RPS20P22

Genetic Association Database (GAD)
RPS20P22

No disorders were found for RPS20P22 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS20P22 Gene

Publications for RPS20P22 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS20P22 Gene

Sources for RPS20P22 Gene

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