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Aliases for RPS20P11 Gene

Aliases for RPS20P11 Gene

  • Ribosomal Protein S20 Pseudogene 11 2 3
  • RPS20_4_266 3
  • AC079922.2 5

External Ids for RPS20P11 Gene

Previous GeneCards Identifiers for RPS20P11 Gene

  • GC02U901667
  • GC02M113380

Summaries for RPS20P11 Gene

GeneCards Summary for RPS20P11 Gene

RPS20P11 (Ribosomal Protein S20 Pseudogene 11) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS20P11 Gene

Genomics for RPS20P11 Gene

Regulatory Elements for RPS20P11 Gene

Enhancers for RPS20P11 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G112642 1.7 Ensembl ENCODE dbSUPER 10.9 -23.8 -23780 6.6 MLX CREB3L1 AGO1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC FLJ42351 TMEM87B RPS20P11 ENSG00000243389 CHCHD5 ENSG00000207383 POLR1B PIR36945 SLC20A1
GH02G112582 1.4 FANTOM5 ENCODE 10.8 +38.1 38064 3.3 HDGF PKNOX1 CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 YBX1 YY1 SLC30A9 POLR1B CHCHD5 TMEM87B RPS20P11 RGPD8 ZC3H6 GC02M112581
GH02G112274 1.2 ENCODE 10.2 +346.5 346464 2.6 MLX CREB3L1 AGO1 ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZNF548 ZNF263 RGPD8 ANAPC1 ZC3H6 RPS20P11 NDUFB4P6
GH02G111882 1.1 ENCODE 10.5 +738.3 738285 2.3 PKNOX1 CREB3L1 ARNT ZFP64 ARID4B SIN3A DMAP1 YY1 ZNF207 ZNF143 TMEM87B RPS20P11 ANAPC1 ENSG00000230958
GH02G112621 2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -5.1 -5064 11.8 HDGF PKNOX1 FOXA2 ARNT CREB3L1 ARID4B SIN3A FEZF1 ZNF2 YY1 FLJ42351 POLR1B CHCHD5 NT5DC4 ENSG00000243389 ENSG00000207383 IL37 IL1B ANAPC1 IL1A
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS20P11 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS20P11 Gene

Chromosome:
2
Start:
112,621,692 bp from pter
End:
112,622,281 bp from pter
Size:
590 bases
Orientation:
Minus strand

Genomic View for RPS20P11 Gene

Genes around RPS20P11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS20P11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS20P11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS20P11 Gene

Proteins for RPS20P11 Gene

Post-translational modifications for RPS20P11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS20P11 Gene

Domains & Families for RPS20P11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS20P11 Gene

Function for RPS20P11 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS20P11 Gene

Localization for RPS20P11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS20P11 Gene

Pathways & Interactions for RPS20P11 Gene

SuperPathways for RPS20P11 Gene

No Data Available

Interacting Proteins for RPS20P11 Gene

Gene Ontology (GO) - Biological Process for RPS20P11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS20P11 Gene

Drugs & Compounds for RPS20P11 Gene

No Compound Related Data Available

Transcripts for RPS20P11 Gene

mRNA/cDNA for RPS20P11 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS20P11 Gene

No ASD Table

Relevant External Links for RPS20P11 Gene

GeneLoc Exon Structure for
RPS20P11
ECgene alternative splicing isoforms for
RPS20P11

Expression for RPS20P11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS20P11 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS20P11 Gene:

RPS20P11
genes like me logo Genes that share expression patterns with RPS20P11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS20P11 Gene

Orthologs for RPS20P11 Gene

Evolution for RPS20P11 Gene

ENSEMBL:
Gene Tree for RPS20P11 (if available)
TreeFam:
Gene Tree for RPS20P11 (if available)

No data available for Orthologs for RPS20P11 Gene

Paralogs for RPS20P11 Gene

No data available for Paralogs for RPS20P11 Gene

Variants for RPS20P11 Gene

Relevant External Links for RPS20P11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS20P11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS20P11 Gene

Disorders for RPS20P11 Gene

No disorders were found for RPS20P11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS20P11 Gene

Publications for RPS20P11 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS20P11 Gene

Sources for RPS20P11 Gene

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