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Aliases for RPS20P11 Gene

Aliases for RPS20P11 Gene

  • Ribosomal Protein S20 Pseudogene 11 2 3
  • RPS20_4_266 3
  • AC079922.2 5

External Ids for RPS20P11 Gene

Previous GeneCards Identifiers for RPS20P11 Gene

  • GC02U901667
  • GC02M113380

Summaries for RPS20P11 Gene

GeneCards Summary for RPS20P11 Gene

RPS20P11 (Ribosomal Protein S20 Pseudogene 11) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS20P11 Gene

Genomics for RPS20P11 Gene

Regulatory Elements for RPS20P11 Gene

Enhancers for RPS20P11 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F112582 0.9 FANTOM5 ENCODE 23.5 +38.1 38064 3.3 HDGF PKNOX1 CREB3L1 WRNIP1 ARID4B SIN3A YBX1 DMAP1 YY1 SLC30A9 POLR1B RPS20P11 CHCHD5 TMEM87B RGPD8 ZC3H6 GC02M112581
GH02F112274 1.2 ENCODE 22.2 +346.5 346464 2.6 CREB3L1 MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZNF548 ZNF263 SP3 ANAPC1 RGPD8 RPS20P11 ZC3H6 TMEM87B NDUFB4P6
GH02F112541 0.2 ENCODE 14.7 +79.7 79702 2.9 HDGF PKNOX1 ARNT CREB3L1 MLX WRNIP1 ZFP64 ARID4B SIN3A DMAP1 POLR1B CHCHD5 RPS20P11 RGPD8 ENSG00000207383 ENSG00000243389 ZC3H8 ANAPC1 LOC105373562 PIR56853
GH02F113323 0.9 Ensembl ENCODE 13.8 -702.6 -702550 2.5 PKNOX1 ZNF48 GLIS2 ZNF366 SCRT2 KLF7 ZNF263 SP3 ZEB2 ZNF264 LOC101927400 RPS20P11 PAX8 ENSG00000227359 PAX8-AS1 PSD4 RGPD8 SLC35F5 CBWD2 ACTR3
GH02F112642 0.5 ENCODE 10.8 -23.8 -23780 6.6 HDGF PKNOX1 CREB3L1 MLX ARID4B SIN3A FEZF1 DMAP1 YY1 SLC30A9 FLJ42351 TMEM87B RPS20P11 ENSG00000243389 CHCHD5 ENSG00000207383 ANAPC1 POLR1B PIR36945 SLC20A1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPS20P11 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS20P11 Gene

Chromosome:
2
Start:
112,621,692 bp from pter
End:
112,622,281 bp from pter
Size:
590 bases
Orientation:
Minus strand

Genomic View for RPS20P11 Gene

Genes around RPS20P11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS20P11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS20P11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS20P11 Gene

Proteins for RPS20P11 Gene

Post-translational modifications for RPS20P11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS20P11 Gene

Domains & Families for RPS20P11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS20P11 Gene

Function for RPS20P11 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS20P11 Gene

Localization for RPS20P11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS20P11 Gene

Pathways & Interactions for RPS20P11 Gene

SuperPathways for RPS20P11 Gene

No Data Available

Interacting Proteins for RPS20P11 Gene

Gene Ontology (GO) - Biological Process for RPS20P11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS20P11 Gene

Transcripts for RPS20P11 Gene

mRNA/cDNA for RPS20P11 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS20P11 Gene

No ASD Table

Relevant External Links for RPS20P11 Gene

GeneLoc Exon Structure for
RPS20P11
ECgene alternative splicing isoforms for
RPS20P11

Expression for RPS20P11 Gene

mRNA expression in normal human tissues for RPS20P11 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS20P11 Gene:

RPS20P11
genes like me logo Genes that share expression patterns with RPS20P11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS20P11 Gene

Orthologs for RPS20P11 Gene

Evolution for RPS20P11 Gene

ENSEMBL:
Gene Tree for RPS20P11 (if available)
TreeFam:
Gene Tree for RPS20P11 (if available)

No data available for Orthologs for RPS20P11 Gene

Paralogs for RPS20P11 Gene

No data available for Paralogs for RPS20P11 Gene

Variants for RPS20P11 Gene

Relevant External Links for RPS20P11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS20P11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS20P11 Gene

Disorders for RPS20P11 Gene

No disorders were found for RPS20P11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS20P11 Gene

Publications for RPS20P11 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS20P11 Gene

Sources for RPS20P11 Gene

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