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Aliases for RPS20P11 Gene

Aliases for RPS20P11 Gene

  • Ribosomal Protein S20 Pseudogene 11 2 3
  • RPS20_4_266 3
  • AC079922.1 5

External Ids for RPS20P11 Gene

Previous GeneCards Identifiers for RPS20P11 Gene

  • GC02U901667
  • GC02M113380

Summaries for RPS20P11 Gene

GeneCards Summary for RPS20P11 Gene

RPS20P11 (Ribosomal Protein S20 Pseudogene 11) is a Pseudogene.

Additional gene information for RPS20P11 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS20P11 Gene

Genomics for RPS20P11 Gene

GeneHancer (GH) Regulatory Elements for RPS20P11 Gene

Promoters and enhancers for RPS20P11 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I112582 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE 20.8 +38.1 38064 3.3 HDGF PKNOX1 SMAD1 ARID4B SIN3A DMAP1 YBX1 IRF4 YY1 SLC30A9 CHCHD5 GC02M112581 LOC101927330 PIR48157 POLR1B TMEM87B RPS20P11 ANAPC1 RGPD8 ZC3H6
GH02I112642 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 10.9 -23.8 -23779 6.6 HDGF PKNOX1 CLOCK FOXA2 SMAD1 MLX ARID4B SIN3A FEZF1 DMAP1 FLJ42351 PIR36945 SLC20A1 TMEM87B ANAPC1 RPS20P11 ENSG00000243389 CHCHD5 ENSG00000207383 POLR1B
GH02I112541 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 11.9 +79.7 79702 2.9 HDGF PKNOX1 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 YY1 POLR2B POLR1B LOC105373562 CHCHD5 ANAPC1 RGPD8 RPS20P11 TMEM87B ENSG00000207383 ENSG00000243389 ZC3H8
GH02I112274 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 10.2 +346.5 346463 2.6 MLX ZFP64 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 ZNF548 ZC3H6 RGPD8 ANAPC1 POLR1B RPS20P11 NDUFB4P6
GH02I111882 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 10.6 +738.3 738284 2.3 PKNOX1 SMAD1 ARNT ZFP64 ARID4B SIN3A DMAP1 IRF4 YY1 POLR2B ANAPC1 TMEM87B RPS20P11 ENSG00000230958
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS20P11 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS20P11 Gene

Genomic Locations for RPS20P11 Gene
chr2:112,621,692-112,622,281
(GRCh38/hg38)
Size:
590 bases
Orientation:
Minus strand
chr2:113,379,342-113,379,858
(GRCh37/hg19)

Genomic View for RPS20P11 Gene

Genes around RPS20P11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS20P11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS20P11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS20P11 Gene

Proteins for RPS20P11 Gene

Post-translational modifications for RPS20P11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS20P11 Gene

Domains & Families for RPS20P11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS20P11 Gene

Function for RPS20P11 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS20P11 Gene

Localization for RPS20P11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS20P11 Gene

Pathways & Interactions for RPS20P11 Gene

SuperPathways for RPS20P11 Gene

No Data Available

Interacting Proteins for RPS20P11 Gene

Gene Ontology (GO) - Biological Process for RPS20P11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS20P11 Gene

Drugs & Compounds for RPS20P11 Gene

No Compound Related Data Available

Transcripts for RPS20P11 Gene

mRNA/cDNA for RPS20P11 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS20P11 Gene

No ASD Table

Relevant External Links for RPS20P11 Gene

GeneLoc Exon Structure for
RPS20P11
ECgene alternative splicing isoforms for
RPS20P11

Expression for RPS20P11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS20P11 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS20P11 Gene:

RPS20P11
genes like me logo Genes that share expression patterns with RPS20P11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS20P11 Gene

Orthologs for RPS20P11 Gene

Evolution for RPS20P11 Gene

ENSEMBL:
Gene Tree for RPS20P11 (if available)
TreeFam:
Gene Tree for RPS20P11 (if available)

No data available for Orthologs for RPS20P11 Gene

Paralogs for RPS20P11 Gene

No data available for Paralogs for RPS20P11 Gene

Variants for RPS20P11 Gene

Additional Variant Information for RPS20P11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS20P11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS20P11 Gene

Disorders for RPS20P11 Gene

No disorders were found for RPS20P11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS20P11 Gene

Publications for RPS20P11 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS20P11 Gene

Sources for RPS20P11 Gene

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