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Aliases for RPS20P10 Gene

Subcategory (RNA class) for RPS20P10 Gene

lncRNA

Aliases for RPS20P10 Gene

  • Ribosomal Protein S20 Pseudogene 10 2 3 5
  • RPS20_3_240 3

External Ids for RPS20P10 Gene

ORGUL Members for RPS20P10 Gene

Previous GeneCards Identifiers for RPS20P10 Gene

  • GC02U901617
  • GC02M072212

Summaries for RPS20P10 Gene

GeneCards Summary for RPS20P10 Gene

RPS20P10 (Ribosomal Protein S20 Pseudogene 10) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS20P10 Gene

Genomics for RPS20P10 Gene

Regulatory Elements for RPS20P10 Gene

Enhancers for RPS20P10 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F071948 1.1 Ensembl ENCODE 0.3 +33.2 33177 5.0 PKNOX1 RAD21 RARA RCOR1 FOS SMARCC1 CEBPB USF2 SMARCB1 ZNF592 RPS20P10 GC02P071827
GH02F071934 1.1 Ensembl ENCODE 0.2 +49.3 49310 2.2 CBX3 ATF1 RAD21 ZNF143 RCOR1 CREM USF2 CEBPB NR2F2 ZNF589 RPS20P10 GC02P071827
GH02F071924 0.8 ENCODE 0.2 +60.3 60299 0.1 HDGF ELF3 CTCF MAX ZSCAN9 RAD21 HBP1 TEAD3 POLR2A ZNF143 RPS20P10 GC02P071827
GH02F071880 1.4 Ensembl ENCODE 0.1 +102.1 102134 4.6 PKNOX1 ARNT CREB3L1 MLX SIN3A ARID4B YY1 SLC30A9 CBX5 FOS GC02P071827 RPS20P10
GH02F071925 0.6 ENCODE 0.2 +58.0 57957 2.4 PKNOX1 FEZF1 ZIC2 ZNF843 GLIS1 ZNF341 FOS EGR2 ZNF18 RPS20P10 GC02P071827
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS20P10 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS20P10 Gene

Chromosome:
2
Start:
71,984,177 bp from pter
End:
71,984,434 bp from pter
Size:
258 bases
Orientation:
Minus strand

Genomic View for RPS20P10 Gene

Genes around RPS20P10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS20P10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS20P10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS20P10 Gene

Proteins for RPS20P10 Gene

Post-translational modifications for RPS20P10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS20P10 Gene

Domains & Families for RPS20P10 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS20P10 Gene

Function for RPS20P10 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS20P10 Gene

Localization for RPS20P10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS20P10 Gene

Pathways & Interactions for RPS20P10 Gene

SuperPathways for RPS20P10 Gene

No Data Available

Interacting Proteins for RPS20P10 Gene

Gene Ontology (GO) - Biological Process for RPS20P10 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS20P10 Gene

Transcripts for RPS20P10 Gene

mRNA/cDNA for RPS20P10 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS20P10 Gene

No ASD Table

Relevant External Links for RPS20P10 Gene

GeneLoc Exon Structure for
RPS20P10
ECgene alternative splicing isoforms for
RPS20P10

Expression for RPS20P10 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS20P10 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS20P10 Gene:

RPS20P10
genes like me logo Genes that share expression patterns with RPS20P10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS20P10 Gene

Orthologs for RPS20P10 Gene

Evolution for RPS20P10 Gene

ENSEMBL:
Gene Tree for RPS20P10 (if available)
TreeFam:
Gene Tree for RPS20P10 (if available)

No data available for Orthologs for RPS20P10 Gene

Paralogs for RPS20P10 Gene

No data available for Paralogs for RPS20P10 Gene

Variants for RPS20P10 Gene

Relevant External Links for RPS20P10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS20P10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS20P10 Gene

Disorders for RPS20P10 Gene

No disorders were found for RPS20P10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS20P10 Gene

Publications for RPS20P10 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS20P10 Gene

Sources for RPS20P10 Gene

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