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Aliases for RPS19P4 Gene

Aliases for RPS19P4 Gene

  • Ribosomal Protein S19 Pseudogene 4 2 3
  • RP11-289K10.1 5
  • RPS19_2_563 3

External Ids for RPS19P4 Gene

Previous GeneCards Identifiers for RPS19P4 Gene

  • GC05P052747

Summaries for RPS19P4 Gene

GeneCards Summary for RPS19P4 Gene

RPS19P4 (Ribosomal Protein S19 Pseudogene 4) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS19P4 Gene

Genomics for RPS19P4 Gene

Regulatory Elements for RPS19P4 Gene

Enhancers for RPS19P4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05G053417 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +8.7 8703 10.3 TBP PKNOX1 FOXA2 BRCA1 RAD21 ZBTB40 RFX5 YY1 GATA2 FOS FST LOC257396 RPS19P4
GH05G053429 1.3 Ensembl ENCODE dbSUPER 0.4 +16.8 16835 2.2 CTCF FOXA2 BACH1 ZNF384 ZNF644 RAD21 YY1 TEAD3 ZNF316 GATA2 FST RPS19P4
GH05G053410 0.7 dbSUPER 0.7 -1.8 -1835 1.9 GATAD2A FOXA2 ZFP64 FOXA3 HLF ZNF426 ZNF394 ZBTB8A ZNF623 ZNF697 LOC257396 RPS19P4 GC05M053350
GH05G053396 1.2 FANTOM5 ENCODE dbSUPER 0.4 -15.6 -15615 2.0 TBP CTCF TAF1 BHLHE40 USF2 CEBPB RAD21 JUND GLIS1 SCRT2 LOC257396 RPS19P4 GC05M053350
GH05G053402 1 ENCODE dbSUPER 0.4 -7.8 -7750 6.2 SOX5 FOXA2 JUN BHLHE40 MAX CEBPB JUNB EP300 RFX5 FOSL1 LOC257396 RPS19P4 GC05M053350
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS19P4 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS19P4 Gene

Chromosome:
5
Start:
53,413,477 bp from pter
End:
53,414,260 bp from pter
Size:
784 bases
Orientation:
Plus strand

Genomic View for RPS19P4 Gene

Genes around RPS19P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS19P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS19P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS19P4 Gene

Proteins for RPS19P4 Gene

Post-translational modifications for RPS19P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS19P4 Gene

Domains & Families for RPS19P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS19P4 Gene

Function for RPS19P4 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS19P4 Gene

Localization for RPS19P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS19P4 Gene

Pathways & Interactions for RPS19P4 Gene

SuperPathways for RPS19P4 Gene

No Data Available

Interacting Proteins for RPS19P4 Gene

Gene Ontology (GO) - Biological Process for RPS19P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS19P4 Gene

Drugs & Compounds for RPS19P4 Gene

No Compound Related Data Available

Transcripts for RPS19P4 Gene

mRNA/cDNA for RPS19P4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS19P4 Gene

No ASD Table

Relevant External Links for RPS19P4 Gene

GeneLoc Exon Structure for
RPS19P4
ECgene alternative splicing isoforms for
RPS19P4

Expression for RPS19P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS19P4 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS19P4 Gene:

RPS19P4
genes like me logo Genes that share expression patterns with RPS19P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS19P4 Gene

Orthologs for RPS19P4 Gene

Evolution for RPS19P4 Gene

ENSEMBL:
Gene Tree for RPS19P4 (if available)
TreeFam:
Gene Tree for RPS19P4 (if available)

No data available for Orthologs for RPS19P4 Gene

Paralogs for RPS19P4 Gene

No data available for Paralogs for RPS19P4 Gene

Variants for RPS19P4 Gene

Relevant External Links for RPS19P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS19P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS19P4 Gene

Disorders for RPS19P4 Gene

Relevant External Links for RPS19P4

Genetic Association Database (GAD)
RPS19P4

No disorders were found for RPS19P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS19P4 Gene

Publications for RPS19P4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox C.S. … Atwood L.D. (BMC Med. Genet. 2007) 46 64

Products for RPS19P4 Gene

Sources for RPS19P4 Gene

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