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Aliases for RPS18P5 Gene

Aliases for RPS18P5 Gene

  • Ribosomal Protein S18 Pseudogene 5 2 3
  • RP11-234A1.1 5
  • RPS18_1_389 3
  • RPS18 3

External Ids for RPS18P5 Gene

Previous GeneCards Identifiers for RPS18P5 Gene

  • GC03M102780
  • GC03M101296

Summaries for RPS18P5 Gene

GeneCards Summary for RPS18P5 Gene

RPS18P5 (Ribosomal Protein S18 Pseudogene 5) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS18P5 Gene

Genomics for RPS18P5 Gene

Regulatory Elements for RPS18P5 Gene

Enhancers for RPS18P5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F101683 1.3 FANTOM5 ENCODE 17.9 -108.8 -108815 5.2 PKNOX1 WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF207 ZNF143 ZBTB11-AS1 RPS18P5 ZBTB11 RPL24 TFG NXPE3 ZNF90P1 PCNP SENP7 TRMT10C
GH03F101704 0.2 Ensembl 11.2 -127.6 -127600 0.8 GTF3C2 RPS18P5 TFG GC03P101704 PIR50522
GH03F101560 0.8 ENCODE 11.1 +14.9 14928 2.3 PKNOX1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 CBX5 ZNF143 CEBPZ SENP7 RPL24 ZBTB11-AS1 NXPE3 RPS18P5 TFG IMPG2 PDCL3P4 TRMT10C PCNP
GH03F101674 0.6 ENCODE 10.9 -99.7 -99731 3.7 HDGF PKNOX1 MLX WRNIP1 ARID4B SIN3A DMAP1 YY1 CBX5 ZNF143 ZBTB11 NXPE3 ZBTB11-AS1 RPL24 RPS18P5 TFG SENP7
GH03F101723 0.7 FANTOM5 ENCODE 10.8 -148.3 -148348 2.9 PKNOX1 ATF1 CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ETS1 YY1 ZNF207 ZBTB11-AS1 NXPE3 ZBTB11 RPL24 RPS18P5 PCNP CEP97
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPS18P5 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS18P5 Gene

Chromosome:
3
Start:
101,576,451 bp from pter
End:
101,576,990 bp from pter
Size:
540 bases
Orientation:
Minus strand

Genomic View for RPS18P5 Gene

Genes around RPS18P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS18P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS18P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS18P5 Gene

Proteins for RPS18P5 Gene

Post-translational modifications for RPS18P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS18P5 Gene

Domains & Families for RPS18P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS18P5 Gene

Function for RPS18P5 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS18P5 Gene

Localization for RPS18P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS18P5 Gene

Pathways & Interactions for RPS18P5 Gene

SuperPathways for RPS18P5 Gene

No Data Available

Interacting Proteins for RPS18P5 Gene

Gene Ontology (GO) - Biological Process for RPS18P5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS18P5 Gene

Transcripts for RPS18P5 Gene

mRNA/cDNA for RPS18P5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS18P5 Gene

No ASD Table

Relevant External Links for RPS18P5 Gene

GeneLoc Exon Structure for
RPS18P5
ECgene alternative splicing isoforms for
RPS18P5

Expression for RPS18P5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS18P5 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS18P5 Gene:

RPS18P5
genes like me logo Genes that share expression patterns with RPS18P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS18P5 Gene

Orthologs for RPS18P5 Gene

Evolution for RPS18P5 Gene

ENSEMBL:
Gene Tree for RPS18P5 (if available)
TreeFam:
Gene Tree for RPS18P5 (if available)

No data available for Orthologs for RPS18P5 Gene

Paralogs for RPS18P5 Gene

No data available for Paralogs for RPS18P5 Gene

Variants for RPS18P5 Gene

Relevant External Links for RPS18P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS18P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS18P5 Gene

Disorders for RPS18P5 Gene

No disorders were found for RPS18P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS18P5 Gene

Publications for RPS18P5 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover. (PMID: 24999758) Elzi D.J. … Shiio Y. (J. Proteome Res. 2014) 3 64
  3. Dynamics of cullin-RING ubiquitin ligase network revealed by systematic quantitative proteomics. (PMID: 21145461) Bennett E.J. … Harper J.W. (Cell 2010) 3 64
  4. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3 64

Products for RPS18P5 Gene

Sources for RPS18P5 Gene

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