Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPS18P2 Gene

Aliases for RPS18P2 Gene

  • Ribosomal Protein S18 Pseudogene 2 2 3
  • RPS18_7_1400 3
  • CTD-3035D6.1 5

External Ids for RPS18P2 Gene

Previous GeneCards Identifiers for RPS18P2 Gene

  • GC14U900078
  • GC14P089223
  • GC14P089224
  • GC14P090302
  • GC14P091233

Summaries for RPS18P2 Gene

GeneCards Summary for RPS18P2 Gene

RPS18P2 (Ribosomal Protein S18 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS18P2 Gene

Genomics for RPS18P2 Gene

Regulatory Elements for RPS18P2 Gene

Enhancers for RPS18P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14G091360 2 FANTOM5 Ensembl ENCODE dbSUPER 13.3 +604.6 604550 21.8 HDGF PKNOX1 FOXA2 WRNIP1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 CCDC88C TRIP11 RPS18P2 PPP4R3A CPSF2 ENSG00000258875 ENSG00000260711 RPS6KA5 GC14M091541 PIR43651
GH14G090610 1.4 Ensembl ENCODE dbSUPER 13.2 -154.0 -153960 3.2 ZFP64 PLRG1 ZNF366 ETV6 RELB CREM IKZF2 ZNF680 ZNF654 CBFB RPS18P2 RPL21P11 LOC102724444 ENSG00000258935
GH14G090300 1.4 Ensembl ENCODE dbSUPER 13.1 -463.3 -463254 5.3 FOXA2 MLX ARID4B RAD21 RARA YY1 ELK1 GATA2 ZNF366 PCBP1 NRDE2 CALM1 RPS18P2 KCNK13 PIR47953 PIR41665
GH14G091573 1.4 Ensembl ENCODE 11.2 +807.9 807881 1.3 HDGF PKNOX1 CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 ZNF207 TRIP11 RPS18P2 CPSF2 TC2N CATSPERB CCDC88C ENSG00000279286 ENSG00000278342
GH14G091507 1.4 ENCODE dbSUPER 10.6 +743.3 743266 4.0 MLX DMAP1 YY1 ZNF143 ZNF548 ZNF263 SP3 NFYC ZNF610 GLIS1 TRIP11 CCDC88C RPS18P2 TC2N PPP4R3A ENSG00000258446
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS18P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS18P2 Gene

Chromosome:
14
Start:
90,766,495 bp from pter
End:
90,767,027 bp from pter
Size:
533 bases
Orientation:
Plus strand

Genomic View for RPS18P2 Gene

Genes around RPS18P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS18P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS18P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS18P2 Gene

Proteins for RPS18P2 Gene

Post-translational modifications for RPS18P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS18P2 Gene

Domains & Families for RPS18P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS18P2 Gene

Function for RPS18P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS18P2 Gene

Localization for RPS18P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS18P2 Gene

Pathways & Interactions for RPS18P2 Gene

SuperPathways for RPS18P2 Gene

No Data Available

Interacting Proteins for RPS18P2 Gene

Gene Ontology (GO) - Biological Process for RPS18P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS18P2 Gene

Drugs & Compounds for RPS18P2 Gene

No Compound Related Data Available

Transcripts for RPS18P2 Gene

mRNA/cDNA for RPS18P2 Gene

(5) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS18P2 Gene

No ASD Table

Relevant External Links for RPS18P2 Gene

GeneLoc Exon Structure for
RPS18P2
ECgene alternative splicing isoforms for
RPS18P2

Expression for RPS18P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS18P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS18P2 Gene:

RPS18P2
genes like me logo Genes that share expression patterns with RPS18P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS18P2 Gene

Orthologs for RPS18P2 Gene

Evolution for RPS18P2 Gene

ENSEMBL:
Gene Tree for RPS18P2 (if available)
TreeFam:
Gene Tree for RPS18P2 (if available)

No data available for Orthologs for RPS18P2 Gene

Paralogs for RPS18P2 Gene

No data available for Paralogs for RPS18P2 Gene

Variants for RPS18P2 Gene

Relevant External Links for RPS18P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS18P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS18P2 Gene

Disorders for RPS18P2 Gene

No disorders were found for RPS18P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS18P2 Gene

Publications for RPS18P2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS18P2 Gene

Sources for RPS18P2 Gene

Content
Loading form....