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Aliases for RPS18P13 Gene

Subcategory (RNA class) for RPS18P13 Gene

lncRNA

Aliases for RPS18P13 Gene

  • Ribosomal Protein S18 Pseudogene 13 2 3 5
  • RPS18_8_1634 3

External Ids for RPS18P13 Gene

ORGUL Members for RPS18P13 Gene

Previous GeneCards Identifiers for RPS18P13 Gene

  • GC19U901021
  • GC19P018161
  • GC19P018255
  • GC19P018138
  • GC19P018197
  • GC19P018322
  • GC19P018344

Summaries for RPS18P13 Gene

GeneCards Summary for RPS18P13 Gene

RPS18P13 (Ribosomal Protein S18 Pseudogene 13) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS18P13 Gene

Genomics for RPS18P13 Gene

Regulatory Elements for RPS18P13 Gene

Enhancers for RPS18P13 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F018043 1.7 FANTOM5 Ensembl ENCODE 0.8 -3.3 -3338 3.2 HDGF PKNOX1 SIN3A ARID4B DMAP1 ZNF2 ZNF766 ZNF143 FOS KLF13 UPF1 ENSG00000268030 MVB12A ENSG00000268199 ENSG00000268938 ARRDC2 IFI30 JUND GC19P019191 RPS18P13
GH19F018048 1.4 FANTOM5 Ensembl ENCODE 0.8 +0.7 665 1.8 HDGF ATF1 YBX1 ZNF48 RAD21 YY1 ZNF335 ZNF121 SMARCA5 USF2 ARRDC2 IFI30 RPS18P13 MAST3
GH19F018050 1 FANTOM5 Ensembl 0.8 +2.7 2713 1.1 HDGF CTCF ZFHX2 ETV6 KLF8 CREM EGR2 ZNF263 MAZ E2F5 RPS18P13 MAST3
GH19F018057 1.3 Ensembl ENCODE 0.4 +9.7 9705 1.5 HDGF ARID4B ZNF2 ZNF48 GLIS2 ZNF207 ZNF143 KLF7 SP3 SP5 KIAA1683 MAST3 RPS18P13
GH19F018053 0.8 Ensembl ENCODE 0.4 +5.1 5138 0.5 BCOR ZNF146 HDAC2 ZMYM3 ARRDC2 RPS18P13 MAST3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS18P13 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS18P13 Gene

Chromosome:
19
Start:
18,048,629 bp from pter
End:
18,049,134 bp from pter
Size:
506 bases
Orientation:
Plus strand

Genomic View for RPS18P13 Gene

Genes around RPS18P13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS18P13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS18P13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS18P13 Gene

Proteins for RPS18P13 Gene

Post-translational modifications for RPS18P13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS18P13 Gene

Domains & Families for RPS18P13 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS18P13 Gene

Function for RPS18P13 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS18P13 Gene

Localization for RPS18P13 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS18P13 Gene

Pathways & Interactions for RPS18P13 Gene

SuperPathways for RPS18P13 Gene

No Data Available

Interacting Proteins for RPS18P13 Gene

Gene Ontology (GO) - Biological Process for RPS18P13 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS18P13 Gene

Transcripts for RPS18P13 Gene

mRNA/cDNA for RPS18P13 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS18P13 Gene

No ASD Table

Relevant External Links for RPS18P13 Gene

GeneLoc Exon Structure for
RPS18P13
ECgene alternative splicing isoforms for
RPS18P13

Expression for RPS18P13 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS18P13 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS18P13 Gene:

RPS18P13
genes like me logo Genes that share expression patterns with RPS18P13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS18P13 Gene

Orthologs for RPS18P13 Gene

Evolution for RPS18P13 Gene

ENSEMBL:
Gene Tree for RPS18P13 (if available)
TreeFam:
Gene Tree for RPS18P13 (if available)

No data available for Orthologs for RPS18P13 Gene

Paralogs for RPS18P13 Gene

No data available for Paralogs for RPS18P13 Gene

Variants for RPS18P13 Gene

Relevant External Links for RPS18P13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS18P13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS18P13 Gene

Disorders for RPS18P13 Gene

No disorders were found for RPS18P13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS18P13 Gene

Publications for RPS18P13 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS18P13 Gene

Sources for RPS18P13 Gene

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