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Aliases for RPS17P7 Gene

Subcategory (RNA class) for RPS17P7 Gene

lncRNA

Aliases for RPS17P7 Gene

  • Ribosomal Protein S17 Pseudogene 7 2 3
  • RPS17_1_271 3
  • AC013399.3 5

External Ids for RPS17P7 Gene

ORGUL Members for RPS17P7 Gene

Previous GeneCards Identifiers for RPS17P7 Gene

  • GC02U901618
  • GC02P122068

Summaries for RPS17P7 Gene

GeneCards Summary for RPS17P7 Gene

RPS17P7 (Ribosomal Protein S17 Pseudogene 7) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS17P7 Gene

Genomics for RPS17P7 Gene

Regulatory Elements for RPS17P7 Gene

Enhancers for RPS17P7 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F121309 0.2 ENCODE 0.8 0.0 -22 0.6 SCRT1 JUN ZFP69B ZNF692 ATF3 ZNF512 SCRT2 FOXJ2 TFCP2L1 RPS17P7
GH02F121323 0.6 ENCODE 0.4 +13.6 13585 0.1 ATF2 RPS17P7 GC02M121365
GH02F121293 0.5 ENCODE 0.3 -16.3 -16313 0.9 OSR2 KLF1 GLIS1 ZBTB8A TFCP2L1 RPS17P7
GH02F121335 0.6 Ensembl 0.3 +25.5 25506 0.2 RFX1 POLR2A RPS17P7 GC02M121365
GH02F121287 0.5 Ensembl 0.3 -22.5 -22495 1.0 HLF TFCP2L1 RPS17P7
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPS17P7 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS17P7 Gene

Chromosome:
2
Start:
121,309,995 bp from pter
End:
121,310,416 bp from pter
Size:
422 bases
Orientation:
Plus strand

Genomic View for RPS17P7 Gene

Genes around RPS17P7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS17P7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS17P7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS17P7 Gene

Proteins for RPS17P7 Gene

Post-translational modifications for RPS17P7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS17P7 Gene

Domains & Families for RPS17P7 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS17P7 Gene

Function for RPS17P7 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS17P7 Gene

Localization for RPS17P7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS17P7 Gene

Pathways & Interactions for RPS17P7 Gene

SuperPathways for RPS17P7 Gene

No Data Available

Interacting Proteins for RPS17P7 Gene

Gene Ontology (GO) - Biological Process for RPS17P7 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS17P7 Gene

Transcripts for RPS17P7 Gene

mRNA/cDNA for RPS17P7 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS17P7 Gene

No ASD Table

Relevant External Links for RPS17P7 Gene

GeneLoc Exon Structure for
RPS17P7
ECgene alternative splicing isoforms for
RPS17P7

Expression for RPS17P7 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS17P7 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS17P7 Gene:

RPS17P7
genes like me logo Genes that share expression patterns with RPS17P7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS17P7 Gene

Orthologs for RPS17P7 Gene

Evolution for RPS17P7 Gene

ENSEMBL:
Gene Tree for RPS17P7 (if available)
TreeFam:
Gene Tree for RPS17P7 (if available)

No data available for Orthologs for RPS17P7 Gene

Paralogs for RPS17P7 Gene

No data available for Paralogs for RPS17P7 Gene

Variants for RPS17P7 Gene

Relevant External Links for RPS17P7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS17P7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS17P7 Gene

Disorders for RPS17P7 Gene

No disorders were found for RPS17P7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS17P7 Gene

Publications for RPS17P7 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS17P7 Gene

Sources for RPS17P7 Gene

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