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Aliases for RPS17P6 Gene

Aliases for RPS17P6 Gene

  • Ribosomal Protein S17 Pseudogene 6 2 3
  • RP11-277B15.1 5
  • RPS17_1_116 3

External Ids for RPS17P6 Gene

Previous GeneCards Identifiers for RPS17P6 Gene

  • GC01M165400

Summaries for RPS17P6 Gene

GeneCards Summary for RPS17P6 Gene

RPS17P6 (Ribosomal Protein S17 Pseudogene 6) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS17P6 Gene

Genomics for RPS17P6 Gene

Regulatory Elements for RPS17P6 Gene

Enhancers for RPS17P6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G167160 1.5 Ensembl ENCODE dbSUPER 0.7 +0.5 500 2.8 PKNOX1 ATF1 FEZF1 ZNF2 ZNF766 ZNF302 KLF7 KLF13 CAVIN1 TSHZ1 GC01P167158 RPS17P6
GH01G167158 0.5 ENCODE dbSUPER 0.7 +4.6 4564 0.2 GC01P167158 RPS17P6
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS17P6 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS17P6 Gene

Chromosome:
1
Start:
167,162,380 bp from pter
End:
167,162,862 bp from pter
Size:
483 bases
Orientation:
Minus strand

Genomic View for RPS17P6 Gene

Genes around RPS17P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS17P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS17P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS17P6 Gene

Proteins for RPS17P6 Gene

Post-translational modifications for RPS17P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS17P6 Gene

Domains & Families for RPS17P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS17P6 Gene

Function for RPS17P6 Gene

Phenotypes for RPS17P6 Gene

GenomeRNAi human phenotypes for RPS17P6:
genes like me logo Genes that share phenotypes with RPS17P6: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS17P6 Gene

Localization for RPS17P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS17P6 Gene

Pathways & Interactions for RPS17P6 Gene

SuperPathways for RPS17P6 Gene

No Data Available

Interacting Proteins for RPS17P6 Gene

Gene Ontology (GO) - Biological Process for RPS17P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS17P6 Gene

Drugs & Compounds for RPS17P6 Gene

No Compound Related Data Available

Transcripts for RPS17P6 Gene

mRNA/cDNA for RPS17P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS17P6 Gene

No ASD Table

Relevant External Links for RPS17P6 Gene

GeneLoc Exon Structure for
RPS17P6
ECgene alternative splicing isoforms for
RPS17P6

Expression for RPS17P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS17P6 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS17P6 Gene:

RPS17P6
genes like me logo Genes that share expression patterns with RPS17P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS17P6 Gene

Orthologs for RPS17P6 Gene

Evolution for RPS17P6 Gene

ENSEMBL:
Gene Tree for RPS17P6 (if available)
TreeFam:
Gene Tree for RPS17P6 (if available)

No data available for Orthologs for RPS17P6 Gene

Paralogs for RPS17P6 Gene

No data available for Paralogs for RPS17P6 Gene

Variants for RPS17P6 Gene

Relevant External Links for RPS17P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS17P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS17P6 Gene

Disorders for RPS17P6 Gene

Relevant External Links for RPS17P6

Genetic Association Database (GAD)
RPS17P6

No disorders were found for RPS17P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS17P6 Gene

Publications for RPS17P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Population-based genome-wide association studies reveal six loci influencing plasma levels of liver enzymes. (PMID: 18940312) Yuan X. … Mooser V. (Am. J. Hum. Genet. 2008) 46 64

Products for RPS17P6 Gene

Sources for RPS17P6 Gene

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