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Aliases for RPS17P16 Gene

Aliases for RPS17P16 Gene

  • Ribosomal Protein S17 Pseudogene 16 2 3
  • RPS17_8_1748 3
  • SC22CB-1E7.1 5

External Ids for RPS17P16 Gene

Previous GeneCards Identifiers for RPS17P16 Gene

  • GC22P030767
  • GC22P032436
  • GC22P032438
  • GC22P032446
  • GC22P032455

Summaries for RPS17P16 Gene

GeneCards Summary for RPS17P16 Gene

RPS17P16 (Ribosomal Protein S17 Pseudogene 16) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS17P16 Gene

Genomics for RPS17P16 Gene

Regulatory Elements for RPS17P16 Gene

Enhancers for RPS17P16 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22F031159 1.1 ENCODE 21.2 -878.8 -878815 2.4 PKNOX1 ARNT CREB3L1 WRNIP1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 TUG1 MORC2 RPS17P16 MGC20647 PRR14L SFI1 RNF185 PIR51329
GH22F031645 1.6 FANTOM5 Ensembl ENCODE 11.5 -392.2 -392214 4.1 WRNIP1 ARID4B FEZF1 GLIS2 FOS JUNB TSHZ1 REST TBX21 ZNF264 MORC2 TUG1 RTCB RPS17P16 SFI1 EIF4ENIF1 ENSG00000240591 DRG1 PISD RNF185
GH22F031247 1.6 FANTOM5 Ensembl ENCODE 11.5 -788.2 -788201 8.5 PKNOX1 MLX ARID4B SIN3A GLIS2 FOS SP3 JUNB REST TSHZ1 MORC2 LIMK2 TUG1 SFI1 RNU6-1128P RPS17P16 RNF185 PIK3IP1 GC22P031249 PPP1R14BP1
GH22F031658 1.4 Ensembl ENCODE 10.4 -378.4 -378419 5.2 HDGF PKNOX1 MLX ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF143 TUG1 RTCB PRR14L MORC2 RPS17P16 EIF4ENIF1 ENSG00000240591 PISD PIK3IP1 MIR7109
GH22F032904 0.8 Ensembl 12.6 +864.8 864836 0.2 USF1 SUZ12 ZNF76 MAX ETS1 NFYB ZNF143 FOS CREM THAP11 RPS17P16 GC22M032860 ENSG00000228194
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS17P16 on UCSC Golden Path with GeneCards custom track

Promoters for RPS17P16 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001843070 136 399

Genomic Location for RPS17P16 Gene

Chromosome:
22
Start:
32,039,465 bp from pter
End:
32,039,944 bp from pter
Size:
480 bases
Orientation:
Plus strand

Genomic View for RPS17P16 Gene

Genes around RPS17P16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS17P16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS17P16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS17P16 Gene

Proteins for RPS17P16 Gene

Post-translational modifications for RPS17P16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS17P16 Gene

Domains & Families for RPS17P16 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS17P16 Gene

Function for RPS17P16 Gene

Phenotypes for RPS17P16 Gene

genes like me logo Genes that share phenotypes with RPS17P16: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS17P16 Gene

Localization for RPS17P16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS17P16 Gene

Pathways & Interactions for RPS17P16 Gene

SuperPathways for RPS17P16 Gene

No Data Available

Interacting Proteins for RPS17P16 Gene

Gene Ontology (GO) - Biological Process for RPS17P16 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS17P16 Gene

Transcripts for RPS17P16 Gene

mRNA/cDNA for RPS17P16 Gene

(1) REFSEQ mRNAs :
(49) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS17P16 Gene

No ASD Table

Relevant External Links for RPS17P16 Gene

GeneLoc Exon Structure for
RPS17P16
ECgene alternative splicing isoforms for
RPS17P16

Expression for RPS17P16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS17P16 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS17P16 Gene:

RPS17P16
genes like me logo Genes that share expression patterns with RPS17P16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS17P16 Gene

Orthologs for RPS17P16 Gene

Evolution for RPS17P16 Gene

ENSEMBL:
Gene Tree for RPS17P16 (if available)
TreeFam:
Gene Tree for RPS17P16 (if available)

No data available for Orthologs for RPS17P16 Gene

Paralogs for RPS17P16 Gene

No data available for Paralogs for RPS17P16 Gene

Variants for RPS17P16 Gene

Relevant External Links for RPS17P16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS17P16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS17P16 Gene

Disorders for RPS17P16 Gene

No disorders were found for RPS17P16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS17P16 Gene

Publications for RPS17P16 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. PAK4 promotes kinase-independent stabilization of RhoU to modulate cell adhesion. (PMID: 26598620) Dart A.E. … Wells C.M. (J. Cell Biol. 2015) 3 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for RPS17P16 Gene

Sources for RPS17P16 Gene

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