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Aliases for RPS17P16 Gene

Aliases for RPS17P16 Gene

  • Ribosomal Protein S17 Pseudogene 16 2 3
  • RPS17_8_1748 3
  • Z74021.1 5

External Ids for RPS17P16 Gene

Previous GeneCards Identifiers for RPS17P16 Gene

  • GC22P030767
  • GC22P032436
  • GC22P032438
  • GC22P032446
  • GC22P032455

Summaries for RPS17P16 Gene

GeneCards Summary for RPS17P16 Gene

RPS17P16 (Ribosomal Protein S17 Pseudogene 16) is a Pseudogene.

Additional gene information for RPS17P16 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS17P16 Gene

Genomics for RPS17P16 Gene

Regulatory Elements for RPS17P16 Gene

Enhancers for RPS17P16 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22H031283 2 FANTOM5 Ensembl ENCODE dbSUPER 10.5 -750.4 -750363 10 PKNOX1 FOXA2 MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 YY1 SLC30A9 SFI1 RNU6-1128P RPS17P16 PATZ1 LINC01521 PIK3IP1 RNF185 LIMK2 SMTN DEPDC5
GH22H031658 1.4 ENCODE dbSUPER 10.4 -378.4 -378419 5 HDGF PKNOX1 MLX ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF143 TUG1 RTCB MORC2 PRR14L DEPDC5 RNF185 RPS17P16 EIF4ENIF1 ENSG00000240591 PISD
GH22H031340 1.3 ENCODE dbSUPER 10.5 -695.3 -695337 8 HDGF PKNOX1 ARNT ZFP64 ARID4B SIN3A DMAP1 ZBTB7B YY1 ZNF766 RPS17P16 SFI1 PIK3IP1 RNF185 PATZ1 PIR42273
GH22H031159 1.1 ENCODE 10.3 -878.8 -878815 2 PKNOX1 FOXA2 ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF766 TUG1 MORC2 SF3A1 PES1 PRR14L DEPDC5 TBC1D10A LOC91370 RPS17P16 SFI1
GH22H032617 0.9 ENCODE dbSUPER 4.7 +577.0 576987 0 SOX5 SOX13 TFAP4 SP5 SMAD4 NR2F6 RAD21 RARA RPS17P16 GC22P032635 LOC105373003
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS17P16 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS17P16 Gene

Chromosome:
22
Start:
32,039,465 bp from pter
End:
32,039,944 bp from pter
Size:
480 bases
Orientation:
Plus strand

Genomic View for RPS17P16 Gene

Genes around RPS17P16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS17P16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS17P16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS17P16 Gene

Proteins for RPS17P16 Gene

Post-translational modifications for RPS17P16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS17P16 Gene

Domains & Families for RPS17P16 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS17P16 Gene

Function for RPS17P16 Gene

Phenotypes for RPS17P16 Gene

genes like me logo Genes that share phenotypes with RPS17P16: view

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS17P16
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS17P16 Gene

Localization for RPS17P16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS17P16 Gene

Pathways & Interactions for RPS17P16 Gene

SuperPathways for RPS17P16 Gene

No Data Available

Interacting Proteins for RPS17P16 Gene

Gene Ontology (GO) - Biological Process for RPS17P16 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS17P16 Gene

Drugs & Compounds for RPS17P16 Gene

No Compound Related Data Available

Transcripts for RPS17P16 Gene

mRNA/cDNA for RPS17P16 Gene

(1) REFSEQ mRNAs :
(49) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS17P16
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPS17P16 Gene

No ASD Table

Relevant External Links for RPS17P16 Gene

GeneLoc Exon Structure for
RPS17P16
ECgene alternative splicing isoforms for
RPS17P16

Expression for RPS17P16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS17P16 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS17P16 Gene:

RPS17P16
genes like me logo Genes that share expression patterns with RPS17P16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS17P16 Gene

Orthologs for RPS17P16 Gene

Evolution for RPS17P16 Gene

ENSEMBL:
Gene Tree for RPS17P16 (if available)
TreeFam:
Gene Tree for RPS17P16 (if available)

No data available for Orthologs for RPS17P16 Gene

Paralogs for RPS17P16 Gene

No data available for Paralogs for RPS17P16 Gene

Variants for RPS17P16 Gene

Relevant External Links for RPS17P16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS17P16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS17P16 Gene

Disorders for RPS17P16 Gene

No disorders were found for RPS17P16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS17P16 Gene

Publications for RPS17P16 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. PAK4 promotes kinase-independent stabilization of RhoU to modulate cell adhesion. (PMID: 26598620) Dart AE … Wells CM (The Journal of cell biology 2015) 3 60
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for RPS17P16 Gene

Sources for RPS17P16 Gene

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