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Aliases for RPS17P15 Gene

Subcategory (RNA class) for RPS17P15 Gene

lncRNA

Aliases for RPS17P15 Gene

  • Ribosomal Protein S17 Pseudogene 15 2 3 5
  • RPS17_7_1173 3

External Ids for RPS17P15 Gene

ORGUL Members for RPS17P15 Gene

Previous GeneCards Identifiers for RPS17P15 Gene

  • GC11U901293
  • GC11M110978

Summaries for RPS17P15 Gene

GeneCards Summary for RPS17P15 Gene

RPS17P15 (Ribosomal Protein S17 Pseudogene 15) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS17P15 Gene

Genomics for RPS17P15 Gene

Regulatory Elements for RPS17P15 Gene

Enhancers for RPS17P15 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F110427 1 ENCODE 16.2 +674.2 674244 7.5 HDGF PKNOX1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF143 ZNF207 FDX1 HNRNPA1P60 ENSG00000270202 LOC105369482 RPS17P15 ENSG00000255028 RNU2-60P ENSG00000271584 ENSG00000271390 GC11P110684
GH11F110305 0.2 ENCODE 16.2 +800.0 800045 0.4 PKNOX1 FEZF1 ZNF2 KLF7 FOS SP3 TSHZ1 ZNF488 ZNF518A ZNF623 HNRNPA1P60 LOC105369482 ENSG00000255028 ENSG00000270202 RPS17P15 ZC3H12C ENSG00000271584 RDX LOC105369486
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPS17P15 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS17P15 Gene

Chromosome:
11
Start:
111,105,547 bp from pter
End:
111,105,895 bp from pter
Size:
349 bases
Orientation:
Minus strand

Genomic View for RPS17P15 Gene

Genes around RPS17P15 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS17P15 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS17P15 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS17P15 Gene

Proteins for RPS17P15 Gene

Post-translational modifications for RPS17P15 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS17P15 Gene

Domains & Families for RPS17P15 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS17P15 Gene

Function for RPS17P15 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS17P15 Gene

Localization for RPS17P15 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS17P15 Gene

Pathways & Interactions for RPS17P15 Gene

SuperPathways for RPS17P15 Gene

No Data Available

Interacting Proteins for RPS17P15 Gene

Gene Ontology (GO) - Biological Process for RPS17P15 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS17P15 Gene

Transcripts for RPS17P15 Gene

mRNA/cDNA for RPS17P15 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS17P15 Gene

No ASD Table

Relevant External Links for RPS17P15 Gene

GeneLoc Exon Structure for
RPS17P15
ECgene alternative splicing isoforms for
RPS17P15

Expression for RPS17P15 Gene

mRNA expression in normal human tissues for RPS17P15 Gene

mRNA differential expression in normal tissues according to GTEx for RPS17P15 Gene

This gene is overexpressed in Testis (x51.6).

NURSA nuclear receptor signaling pathways regulating expression of RPS17P15 Gene:

RPS17P15
genes like me logo Genes that share expression patterns with RPS17P15: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS17P15 Gene

Orthologs for RPS17P15 Gene

Evolution for RPS17P15 Gene

ENSEMBL:
Gene Tree for RPS17P15 (if available)
TreeFam:
Gene Tree for RPS17P15 (if available)

No data available for Orthologs for RPS17P15 Gene

Paralogs for RPS17P15 Gene

No data available for Paralogs for RPS17P15 Gene

Variants for RPS17P15 Gene

Relevant External Links for RPS17P15 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS17P15

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS17P15 Gene

Disorders for RPS17P15 Gene

No disorders were found for RPS17P15 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS17P15 Gene

Publications for RPS17P15 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS17P15 Gene

Sources for RPS17P15 Gene

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