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Aliases for RPS17P12 Gene

Aliases for RPS17P12 Gene

  • Ribosomal Protein S17 Pseudogene 12 2 3
  • RPS17_5_854 3
  • AC008155.2 5

External Ids for RPS17P12 Gene

Previous GeneCards Identifiers for RPS17P12 Gene

  • GC07M137635
  • GC07M137983

Summaries for RPS17P12 Gene

GeneCards Summary for RPS17P12 Gene

RPS17P12 (Ribosomal Protein S17 Pseudogene 12) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS17P12 Gene

Genomics for RPS17P12 Gene

Regulatory Elements for RPS17P12 Gene

Enhancers for RPS17P12 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F138294 0.2 Ensembl 0.8 +3.8 3807 1.0 ELF3 HDAC1 SIN3A RARA RCOR1 MEF2D IKZF1 CEBPA HMBOX1 IRF1 ENSG00000201465 RPS17P12 GC07M138188
GH07F138303 0.6 ENCODE 0.4 -5.6 -5582 2.0 HDGF PKNOX1 RAD21 GATA3 CTBP1 ZNF366 ZNF169 EED RCOR1 PRDM10 TRIM24 ENSG00000201465 ENSG00000252820 RPS17P12 GC07M138404
GH07F138285 0.2 ENCODE 0.4 +13.2 13197 0.2 SMAD4 BCL6 RARA RXRB RPS17P12 ENSG00000201465 GC07M138188
GH07F138313 1.3 FANTOM5 ENCODE 0.3 -17.0 -16993 4.3 HDGF PKNOX1 CREB3L1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 TRIM24 TTC26 RPL6P19 ZC3HAV1L RPS17P12 GC07M138404
GH07F138327 0.2 ENCODE 0.3 -29.8 -29827 1.2 SOX13 ELF3 SAP130 TEAD4 CEBPG ZNF48 ZBTB40 RAD21 TEAD3 TRIM24 TRIM24 RPS17P12 GC07M138404
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPS17P12 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS17P12 Gene

Chromosome:
7
Start:
138,298,061 bp from pter
End:
138,298,507 bp from pter
Size:
447 bases
Orientation:
Minus strand

Genomic View for RPS17P12 Gene

Genes around RPS17P12 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS17P12 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS17P12 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS17P12 Gene

Proteins for RPS17P12 Gene

Post-translational modifications for RPS17P12 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS17P12 Gene

Domains & Families for RPS17P12 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS17P12 Gene

Function for RPS17P12 Gene

Phenotypes for RPS17P12 Gene

GenomeRNAi human phenotypes for RPS17P12:
genes like me logo Genes that share phenotypes with RPS17P12: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS17P12 Gene

Localization for RPS17P12 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS17P12 Gene

Pathways & Interactions for RPS17P12 Gene

SuperPathways for RPS17P12 Gene

No Data Available

Interacting Proteins for RPS17P12 Gene

Gene Ontology (GO) - Biological Process for RPS17P12 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS17P12 Gene

Transcripts for RPS17P12 Gene

mRNA/cDNA for RPS17P12 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS17P12 Gene

No ASD Table

Relevant External Links for RPS17P12 Gene

GeneLoc Exon Structure for
RPS17P12
ECgene alternative splicing isoforms for
RPS17P12

Expression for RPS17P12 Gene

mRNA expression in normal human tissues for RPS17P12 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS17P12 Gene:

RPS17P12
genes like me logo Genes that share expression patterns with RPS17P12: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS17P12 Gene

Orthologs for RPS17P12 Gene

Evolution for RPS17P12 Gene

ENSEMBL:
Gene Tree for RPS17P12 (if available)
TreeFam:
Gene Tree for RPS17P12 (if available)

No data available for Orthologs for RPS17P12 Gene

Paralogs for RPS17P12 Gene

No data available for Paralogs for RPS17P12 Gene

Variants for RPS17P12 Gene

Relevant External Links for RPS17P12 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS17P12

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS17P12 Gene

Disorders for RPS17P12 Gene

Relevant External Links for RPS17P12

Genetic Association Database (GAD)
RPS17P12

No disorders were found for RPS17P12 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS17P12 Gene

Publications for RPS17P12 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Framingham Heart Study genome-wide association: results for pulmonary function measures. (PMID: 17903307) Wilk J.B. … O'Connor G.T. (BMC Med. Genet. 2007) 46 64
  3. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer S.W. … Tsui L.-C. (Science 2003) 3 64

Products for RPS17P12 Gene

Sources for RPS17P12 Gene

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