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Aliases for RPS16P9 Gene

Aliases for RPS16P9 Gene

  • Ribosomal Protein S16 Pseudogene 9 2 3 5
  • RPS16_5_1659 3

External Ids for RPS16P9 Gene

Previous GeneCards Identifiers for RPS16P9 Gene

  • GC19M050533
  • GC19M045836

Summaries for RPS16P9 Gene

GeneCards Summary for RPS16P9 Gene

RPS16P9 (Ribosomal Protein S16 Pseudogene 9) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS16P9 Gene

Genomics for RPS16P9 Gene

Regulatory Elements for RPS16P9 Gene

Enhancers for RPS16P9 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F045401 1 FANTOM5 ENCODE 16.3 -71.4 -71385 6.2 HDGF PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A FEZF1 YY1 ZNF207 ZNF180 CD3EAP ENSG00000259605 CCDC61 ENSG00000267395 ERCC1 ENSG00000268810 EXOC3L2 RPS16P9 ENSG00000267614
GH19F045466 0.4 ENCODE 16.2 -135.9 -135909 4.3 HDGF PKNOX1 CREB3L1 ARID4B SIN3A DMAP1 ZNF143 ZNF416 ZNF207 FOS ZNF180 CCDC61 FBXO46 CD3EAP ENSG00000266958 IGFL4 RPS16P9 ENSG00000267614 ENSG00000269148 ENSG00000268810
GH19F045861 1 Ensembl ENCODE 16.2 -531.4 -531401 5.7 HDGF PKNOX1 ARNT CREB3L1 MLX ARID4B SIN3A FEZF1 DMAP1 ZNF2 DMWD ENSG00000267395 ENSG00000268810 ENSG00000259605 RPS16P9 SYMPK SLC1A5 EXOC3L2 IRF2BP1 MYPOP
GH19F045880 1.3 FANTOM5 Ensembl ENCODE 16.2 -549.1 -549141 3.5 HDGF PKNOX1 ARNT MLX ARID4B SIN3A YBX1 YY1 SLC30A9 ZNF207 RPS16P9 BHMG1 IRF2BP1 FBXO46 SYMPK FOXA3 OPA3 GIPR GC19M045838
GH19F044586 1.1 FANTOM5 Ensembl ENCODE 16.2 +743.0 742999 8.1 CREB3L1 ZFP64 FEZF1 DMAP1 YY1 ZNF143 ZNF548 ZNF263 SP3 TBX21 ZNF180 ZNF45 ZNF234 ZNF155 ZNF284 ZNF225 NECTIN2 EXOC3L2 LOC105372418 ENSG00000267614
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPS16P9 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS16P9 Gene

Chromosome:
19
Start:
45,332,629 bp from pter
End:
45,333,188 bp from pter
Size:
560 bases
Orientation:
Minus strand

Genomic View for RPS16P9 Gene

Genes around RPS16P9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS16P9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS16P9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS16P9 Gene

Proteins for RPS16P9 Gene

Post-translational modifications for RPS16P9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS16P9 Gene

Domains & Families for RPS16P9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS16P9 Gene

Function for RPS16P9 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS16P9 Gene

Localization for RPS16P9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS16P9 Gene

Pathways & Interactions for RPS16P9 Gene

SuperPathways for RPS16P9 Gene

No Data Available

Interacting Proteins for RPS16P9 Gene

Gene Ontology (GO) - Biological Process for RPS16P9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS16P9 Gene

Transcripts for RPS16P9 Gene

mRNA/cDNA for RPS16P9 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS16P9 Gene

No ASD Table

Relevant External Links for RPS16P9 Gene

GeneLoc Exon Structure for
RPS16P9
ECgene alternative splicing isoforms for
RPS16P9

Expression for RPS16P9 Gene

mRNA expression in normal human tissues for RPS16P9 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS16P9 Gene:

RPS16P9
genes like me logo Genes that share expression patterns with RPS16P9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS16P9 Gene

Orthologs for RPS16P9 Gene

Evolution for RPS16P9 Gene

ENSEMBL:
Gene Tree for RPS16P9 (if available)
TreeFam:
Gene Tree for RPS16P9 (if available)

No data available for Orthologs for RPS16P9 Gene

Paralogs for RPS16P9 Gene

No data available for Paralogs for RPS16P9 Gene

Variants for RPS16P9 Gene

Relevant External Links for RPS16P9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS16P9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS16P9 Gene

Disorders for RPS16P9 Gene

No disorders were found for RPS16P9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS16P9 Gene

Publications for RPS16P9 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS16P9 Gene

Sources for RPS16P9 Gene

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