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RPS16 Gene

protein-coding   GIFtS: 64
GCID: GC19M039923

Ribosomal Protein S16

  Search for RPS16
at  

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
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Aliases
Ribosomal Protein S161 2
40S Ribosomal Protein S161 2
S162

External Ids:    HGNC: 103961   Entrez Gene: 62172   Ensembl: ENSG000001051937   OMIM: 6036755   UniProtKB: P622493   

Export aliases for RPS16 gene to outside databases

Previous GC identifers: GC19M040561 GC19M040315 GC19M044596 GC19M044615 GC19M036370


(According to Entrez Gene, GeneCards, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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Entrez Gene summary for RPS16 Gene:
Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit.
Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This
gene encodes a ribosomal protein that is a component of the 40S subunit. The protein belongs to the S9P family of
ribosomal proteins. It is located in the cytoplasm. As is typical for genes encoding ribosomal proteins, there
are multiple processed pseudogenes of this gene dispersed through the genome. (provided by RefSeq, Jul 2008)

GeneCards Summary for RPS16 Gene:
RPS16 (ribosomal protein S16) is a protein-coding gene. GO annotations related to this gene include structural constituent of ribosome and RNA binding.

Gene Wiki entry for RPS16 Gene


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 75), Regulatory elements and Epigenetics data according to QIAGEN, and/or SwitchGear Genomics)
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RefSeq DNA sequence at NCBI GenBank:
NC_000019.9  NT_011109.17  NC_018930.2  
Regulatory elements:
   Regulatory transcription factor binding sites in the RPS16 gene promoter:
         ISGF-3   p53   GATA-2   YY1   GATA-1   Ik-2   HSF2   ZIC2/Zic2   Pax-4a   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidRPS16 promoter sequence
   Search Chromatin IP Primers for RPS16

Epigenetics:
DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat RPS16


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 19q13.1   Ensembl cytogenetic band:  19q13.2   HGNC cytogenetic band: 19q13.1

RPS16 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
RPS16 gene location

GeneLoc information about chromosome 19         GeneLoc Exon Structure

GeneLoc location for GC19M039923:  view genomic region     (about GC identifiers)

Start:
39,923,847 bp from pter      End:
39,926,618 bp from pter
Size:
2,772 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, 2neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, Cloud-Clone Corp., and/or eBioscience,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, Cloud-Clone Corp., and/or eBioscience, Antibodies by EMD Millipore, R&D Systems, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, Cloud-Clone Corp, and/or others.)
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UniProtKB/Swiss-Prot: RS16_HUMAN, P62249 (See protein sequence)
Recommended Name: 40S ribosomal protein S16  
Size: 146 amino acids; 16445 Da
1 PDB 3D structure from and Proteopedia for RPS16:
3J3A (3D)    
Secondary accessions: B2RDD5 P17008

Explore the universe of human proteins at neXtProt for RPS16: NX_P62249

Explore proteomics data for RPS16 at MOPED

Post-translational modifications: 

  • Ubiquitination2 at Lys4, Lys33, Lys50, Lys60, Lys73, Lys90, Lys98, Lys109
  • Modification sites at PhosphoSitePlus

  • See RPS16 Protein Expression from SPIRE MOPED, PaxDB, and MaxQB

    REFSEQ proteins: NP_001011.1  
    ENSEMBL proteins: 
     ENSP00000473220   ENSP00000367806   ENSP00000251453   ENSP00000472231   ENSP00000468957  
     ENSP00000471983  
    Reactome Protein details: P62249

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    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
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    HGNC Gene Families:
    RPS: S ribosomal proteins

    4 InterPro protein domains:
     IPR020574 Ribosomal_S9_CS
     IPR020568 Ribosomal_S5_D2-typ_fold
     IPR000754 Ribosomal_S9
     IPR014721 Ribosomal_S5_D2-typ_fold_subgr

    Graphical View of Domain Structure for InterPro Entry P62249

    ProtoNet protein and cluster: P62249

    UniProtKB/Swiss-Prot: RS16_HUMAN, P62249
    Similarity: Belongs to the ribosomal protein S9P family


    Find genes that share domains with RPS16           About GenesLikeMe


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
    transcription factor targeting from QIAGEN and/or HOMER, miRNA Gene Targets from miRTarBase, shRNA from OriGene, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, SwitchGear Genomics, Gene Editing from DNA2.0, Clones from OriGene, GenScript, Sino Biological, DNA2.0, Vector BioLabs and/or Addgene, Cell Lines from GenScript, ESI BIO, In Situ Hybridization Assays from Advanced Cell Diagnostics, Flow cytometry from eBioscience, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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    Molecular Function:
         Genatlas biochemistry entry for RPS16:
    40S ribosomal protein S16,16kDa

         Gene Ontology (GO): 3 molecular function terms:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003723RNA binding IDA17881366
    GO:0003735structural constituent of ribosome IEA--
    GO:0044822poly(A) RNA binding IDA--
         
    Find genes that share ontologies with RPS16           About GenesLikeMe


    Phenotypes:
         10 GenomeRNAi human phenotypes for RPS16:
     Decreased Hepatitis C virus re  Decreased influenza A H1N1 (A/  Decreased influenza A/WSN/33 r  Decreased viability of wild-ty 
     Elongated cells  G2 arrest  Increased S DNA content  Increased gamma-H2AX phosphory 
     Nuclear 40S maturation defects  Nucleolar pre-40S maturation d 

    Animal Models:
       inGenious Targeting Laboratory: Let us create your new Knockout/Knockin mouse model for RPS16
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    miRNA
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    miRTarBase miRNAs that target RPS16:
    hsa-mir-17-3p (MIRT050772), hsa-mir-149-5p (MIRT045423), hsa-mir-1296-5p (MIRT036088), hsa-mir-652-3p (MIRT039569), hsa-mir-24-3p (MIRT050371), hsa-mir-320a (MIRT044589), hsa-mir-1303 (MIRT035883)

    Block miRNA regulation of human, mouse, rat RPS16 using miScript Target Protectors
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    Browse Sino Biological Human cDNA Clones
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    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat RPS16

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    eBioscience FlowRNA Probe Sets ( VA1-14044 VA6-14091) for RPS16 


    (According to UniProtKB, COMPARTMENTS Subcellular localization database, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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    Subcellular locations from COMPARTMENTS: 

    CompartmentConfidence
    cytosol5
    chloroplast3
    nucleus2
    mitochondrion1

    Gene Ontology (GO): 5 cellular component terms:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005829cytosol TAS--
    GO:0005840ribosome ----
    GO:0015935small ribosomal subunit IDA15883184
    GO:0022627cytosolic small ribosomal subunit NAS2016298
    GO:0070062extracellular vesicular exosome IDA--

    Find genes that share ontologies with RPS16           About GenesLikeMe


    (SuperPaths according to PathCards, Pathways according to R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to QIAGEN, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene).
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    SuperPaths for RPS16 About   (see all 6)  
    See pathways by source

    SuperPathSelected contained pathways About (see all per SuperPath)
    1CFTR translational fidelity class I mutations
    CFTR translational fidelity class I mutations 0.60
    Ribosome0.54
    Cytoplasmic Ribosomal Proteins0.60
    2Influenza Viral RNA Transcription and Replication
    Viral mRNA Translation0.94
    Eukaryotic Translation Initiation0.89
    Peptide chain elongation0.94
    Cap-dependent Translation Initiation0.89
    Nonsense Mediated Decay Independent of the Exon Junction Complex0.94
    Nonsense Mediated Decay Enhanced by the Exon Junction Complex0.89
    Formation of a pool of free 40S subunits0.94
    Nonsense-Mediated Decay0.89
    3Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S
    Translation initiation complex formation0.91
    Ribosomal scanning and start codon recognition0.91
    Formation of the ternary complex, and subsequently, the 43S complex0.91
    Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S0.90
    4Gene Expression
    Gene Expression0.40
    5Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
    Metabolism of proteins0.30


    Find genes that share SuperPaths with RPS16           About GenesLikeMe

    Pathways by source                                                                                                                                                                 See SuperPaths
    Show all pathways


    1 GeneGo (Thomson Reuters) Pathway for RPS16
        CFTR translational fidelity (class I mutations)

    1 BioSystems Pathway for RPS16
        Cytoplasmic Ribosomal Proteins

    Selected Reactome Pathways for RPS16 (see all 12)
        Peptide chain elongation
    Formation of the ternary complex, and subsequently, the 43S complex
    Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
    Viral mRNA Translation
    GTP hydrolysis and joining of the 60S ribosomal subunit


    1 Kegg Pathway  (Kegg details for RPS16):
        Ribosome

        Custom Pathway & Disease-focused RT2 Profiler PCR Arrays for RPS16
    Interactions:

        Search GeneGlobe Interaction Network for RPS16

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    Selected Interacting proteins for RPS16 (P622492, 3 ENSP000002514534) via UniProtKB, MINT, STRING, and/or I2D (see all 588)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    RPS4XP627012, 3, ENSP000003627444MINT-6542674 MINT-8395092 I2D: score=2 STRING: ENSP00000362744
    RPL12P300502, 3, ENSP000003547394MINT-6542674 MINT-8395092 I2D: score=1 STRING: ENSP00000354739
    RPL8P629172, 3, ENSP000002625844MINT-6542674 I2D: score=4 STRING: ENSP00000262584
    RPS2P158802, 3, ENSP000003418854MINT-6542674 I2D: score=4 STRING: ENSP00000341885
    RPS3P233962, 3, ENSP000002785724MINT-6542674 I2D: score=4 STRING: ENSP00000278572
    About this table

    Gene Ontology (GO): Selected biological process terms (see all 15):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000184nuclear-transcribed mRNA catabolic process, nonsense-mediated decay TAS--
    GO:0006364rRNA processing IMP18697920
    GO:0006412translation TAS--
    GO:0006413translational initiation TAS--
    GO:0006414translational elongation TAS--

    Find genes that share ontologies with RPS16           About GenesLikeMe



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience, ApexBio, HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB)
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    Browse Small Molecules at EMD Millipore
       Browse drugs & compounds from Enzo Life Sciences
      Browse compounds at ApexBio 

    Browse Tocris compounds for RPS16 (RS16)



    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN, SwitchGear Genomics,
    Tagged/untagged cDNA clones from OriGene, GenScript, DNA2.0, Vector BioLabs, and/or Addgene, Primers from OriGene, and/or QIAGEN, Flow cytometry from eBioscience )
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    REFSEQ mRNAs for RPS16 gene: 
    NM_001020.4  

    Unigene Cluster for RPS16:

    Ribosomal protein S16
    Hs.397609  [show with all ESTs]
    Unigene Representative Sequence: AK055869
    8 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000599539 ENST00000339471(uc002olm.3) ENST00000251453(uc002olk.3 uc002oll.3)
    ENST00000601655 ENST00000602153 ENST00000601390 ENST00000595386 ENST00000599705

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    Additional mRNA sequence: 

    AK055869.1 AK315498.1 BC004324.2 BC007977.2 BC024970.1 BC071674.1 BC095429.1 M60854.1 

    Selected DOTS entries (see all 67):

    DT.450891  DT.95150319  DT.91779566  DT.101956204  DT.101985755  DT.95297234  DT.92057789  DT.100739929 
    DT.97869259  DT.100739956  DT.100739936  DT.121504318  DT.100739962  DT.100867295  DT.100739967  DT.121504302 
    DT.91779557  DT.97869279  DT.100841456  DT.91787375  DT.100739965  DT.121504287  DT.121504322  DT.100739913 

    Selected AceView cDNA sequences (see all 2309):

    AW059552 CB133278 BM968788 BE301975 AW600313 BQ637442 AJ705127 AI694887 
    BU185751 AJ705699 BE279892 AJ346321 T52852 BQ056100 BE903081 BQ637307 
    AI355627 AJ705425 AI626108 BP368635 BU542798 F33618 CB108758 AI240337 

    GeneLoc Exon Structure

    Selected Alternative Splicing Database (ASD) splice patterns (SP) for RPS16 (see all 8)    About this scheme

    ExUns: 1a · 1b · 1c · 1d · 1e ^ 2a · 2b · 2c ^ 3a · 3b ^ 4a · 4b ^ 5a · 5b · 5c
    SP1:                                            -     -                 -                     
    SP2:                                            -     -                 -                     
    SP3:                                            -     -                 -                     
    SP4:                                      -     -     -                 -                     
    SP5:                                            -     -                                       


    ECgene alternative splicing isoforms for RPS16

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MaxQB, plus additional links to SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from QIAGEN, Primers from OriGene, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
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    RPS16 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: CCGTCCAAGG
    RPS16 Expression
    About this image


    RPS16 expression in embryonic tissues and stem cells    About this table
    Data from LifeMap, the Embryonic Development and Stem Cells Database
     
     Endoderm (Gastrulation Derivatives)
             Endoderm-like cells
    RPS16 Protein expression data from MOPED1, PaxDb2 and MaxQB3    About this image

    RPS16 Protein Expression

    SOURCE GeneReport for Unigene cluster: Hs.397609
        Custom PCR Arrays for RPS16
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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RPS16

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
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    This gene was present in the common ancestor of eukaryotes.

    Orthologs for RPS16 gene from Selected species (see all 28)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Rps161 , 5 ribosomal protein S161, 5 89.5(n)1
    100(a)1
      7 (16.70 cM)5
    200551  NM_013647.21  NP_038675.21 
     283506525 
    chicken
    (Gallus gallus)
    Aves RPS161 ribosomal protein S16 79.91(n)
    98.63(a)
      417871  XM_416113.4  XP_416113.1 
    lizard
    (Anolis carolinensis)
    Reptilia RPS166
    ribosomal protein S16
    99(a)
    1 ↔ 1
    5(37293729-37297695)
    African clawed frog
    (Xenopus laevis)
    Amphibia CF271176.12   -- 80.97(n)    CF271176.1 
    zebrafish
    (Danio rerio)
    Actinopterygii rps161 ribosomal protein S16 82.65(n)
    96.58(a)
      767765  NM_001076732.2  NP_001070200.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG40463
    RpS161
    protein biosynthesis structural
    constituent of more3
    Ribosomal protein S161
    88(a)3
    78.49(n)1
    88.65(a)1
      58F13
    375801  NM_137841.31  NP_611685.11 
    worm
    (Caenorhabditis elegans)
    Secernentea rps-161 , 3 40S ribosomal protein S163
    rps-161
    77(a)3
    71.43(n)1
    77.14(a)1
      V(15002275-15003212)3
    1799981  NM_074289.51  NP_506690.11 
    baker's yeast
    (Saccharomyces cerevisiae)
    Saccharomycetes RPS16B(YDL083C)4
    RPS16A1
    Protein component of the small (40S) ribosomal subunit; more4
    RPS16A1
    57.97(n)1
    65.94(a)1
      4(307789-306926)4
    8551741  NP_013863.21  8514764 
     NP_010200.14 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons AT5G183801 AT5G18380 68.26(n)
    73.97(a)
      831956  NM_121843.2  NP_197339.1 
    rice
    (Oryza sativa)
    Liliopsida AK058697.12   -- 75.54(n)    AK058697.1 


    ENSEMBL Gene Tree for RPS16 (if available)
    TreeFam Gene Tree for RPS16 (if available)

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
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    Paralogs for RPS16 gene

    Find genes that share paralogs with RPS16           About GenesLikeMe


    Selected Pseudogenes.org Pseudogenes for RPS16 (see all 11)
    PGOHUM00000242766 PGOHUM00000242871 PGOHUM00000248698 PGOHUM00000237327 PGOHUM00000234356


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD), the Human Cytochrome P450 Allele Nomenclature Database, and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers, Cancer Mutation PCR Arrays and Assays, and Copy Number PCR Arrays from QIAGEN)
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    Selected SNPs for RPS16 (see all 156)    About this table                                 

    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 19 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1906094621,2
    --39923366(+) GTCTCC/TACAAA 1 -- ds50010--------
    rs789794301,2
    C--39923374(+) AAAAC-/AAAAAA 1 -- ds50011Minor allele frequency- A:0.50CSA 2
    rs616395591,2
    C,F--39923402(+) GCTCTG/CGCCTG 1 -- ds50011Minor allele frequency- C:0.00CSA 1
    rs1133742431,2
    C,F--39923403(+) CTCTCG/ACCTGT 1 -- ds50011Minor allele frequency- A:0.50NA 2
    rs104152791,2
    C,F,A--39923432(+) ggcccG/Aggaag 1 -- ds50013Minor allele frequency- A:0.40NA WA CSA 5
    rs735479911,2
    C,F--39923496(+) CCATCG/CATACT 1 -- ds50011Minor allele frequency- C:0.50WA 2
    rs1809256021,2
    --39923546(+) TAATCC/TAAGCT 1 -- ds50010--------
    rs1862543421,2
    --39923551(+) CAAGCC/TATTTG 1 -- ds50010--------
    rs1129304521,2
    C--39923572(+) CTTGAA/CAAAAA 1 -- ds50012Minor allele frequency- C:0.02WA 120
    rs1910569201,2
    C--39923677(+) CTCTAC/TTGGAG 1 -- ds50010--------

    HapMap Linkage Disequilibrium report for RPS16 (39923847 - 39926618 bp)

    Structural Variations
         Database of Genomic Variants (DGV) 7 variations for RPS16:    About this table    
    Variant IDTypeSubtypePubMed ID
    nsv523856CNV Loss19592680
    nsv911685CNV Loss21882294
    nsv911680CNV Loss21882294
    nsv911679CNV Loss21882294
    dgv3860n71CNV Loss21882294
    dgv3863n71CNV Loss21882294
    dgv3861n71CNV Loss21882294

    Site Specific Mutation Identification with PCR Assays
    SeqTarget long-range PCR primers for resequencing RPS16
    DNA2.0 Custom Variant and Variant Library Synthesis for RPS16

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
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    OMIM gene information: 603675    OMIM disorders: --

    1 disease from the University of Copenhagen DISEASES database for RPS16:
    Diamond-Blackfan anemia

    Find genes that share disorders with RPS16           About GenesLikeMe

    Genetic Association Database (GAD): RPS16
    Human Genome Epidemiology (HuGE) Navigator: RPS16 (1 document)

    Export disorders for RPS16 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
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    PubMed articles for RPS16 gene, integrated from 10 sources (see all 82):
    (articles sorted by number of sources associating them with RPS16)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Molecular cloning and sequence analysis of the human ribosomal protein S16. (PubMed id 2016298)1, 2, 3, 9 Batra S.K.... Hollingsworth M.A. (J. Biol. Chem. 1991)
    2. Diamond-Blackfan anemia: genotype-phenotype correlations in Italian patients with RPL5 and RPL11 mutations. (PubMed id 19773262)1, 4 Quarello P....Ramenghi U. (Haematologica 2010)
    3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (Nat. Genet. 2004)
    4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S.... Malek J. (Genome Res. 2004)
    5. The human ribosomal protein genes: sequencing and comparative analysis of 73 genes. (PubMed id 11875025)1, 2 Yoshihama M.... Kenmochi N. (Genome Res. 2002)
    6. A map of 75 human ribosomal protein genes. (PubMed id 9582194)1, 3 Kenmochi N.... Page D.C. (Genome Res. 1998)
    7. Characterization of the human small-ribosomal-subunit proteins by N- terminal and internal sequencing, and mass spectrometry. (PubMed id 8706699)1, 2 Vladimirov S.N.... Otto A. (Eur. J. Biochem. 1996)
    8. [Human ribosomal protein S16 inhibites excision of the first intron from its own]. (PubMed id 20198863)1, 9 Ivanov A.V....Karpova G.G. (Mol. Biol. (Mosk.) 2010)
    9. Interactions of human ribosomal proteins S16 and S5 with an 18S rRNA fragment containing their binding sites. (PubMed id 19559069)1, 9 Malygin A.A....Karpova G.G. (Biochimie 2009)
    10. [Binding of human ribosomal protein S16 with the 18S rRNA fragment 1203-1236/1521-1698]. (PubMed id 18318121)1, 9 Ian'shina D.D....Karpova G.G. (Mol. Biol. (Mosk.) 2007)

    (in PubMed, OMIM, and NCBI Bookshelf)
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     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
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    Entrez Gene: 6217 HGNC: 10396 AceView: RPS16 Ensembl:ENSG00000105193 euGenes: HUgn6217
    ECgene: RPS16 Kegg: 6217 H-InvDB: RPS16

    (According to HUGE)
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      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL, and/or others, e.g. Wikipedia and GeneReviews, via UniProtKB/Swiss-Prot)
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    NameDescription
    PharmGKB entry for RPS16 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
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    Patent Information for RPS16 gene:
    Search GeneIP for patents involving RPS16

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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