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Aliases for RPS15P9 Gene

Subcategory (RNA class) for RPS15P9 Gene

lncRNA

Aliases for RPS15P9 Gene

  • Ribosomal Protein S15 Pseudogene 9 2 3 5
  • RPS15_5_1616 3

External Ids for RPS15P9 Gene

ORGUL Members for RPS15P9 Gene

Previous GeneCards Identifiers for RPS15P9 Gene

  • GC19M001258
  • GC19M001308
  • GC19M001309
  • GC19M001320
  • GC19M001333
  • GC19M001343
  • GC19M001354
  • GC19M001364
  • GC19M001375

Summaries for RPS15P9 Gene

GeneCards Summary for RPS15P9 Gene

RPS15P9 (Ribosomal Protein S15 Pseudogene 9) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS15P9 Gene

Genomics for RPS15P9 Gene

Regulatory Elements for RPS15P9 Gene

Enhancers for RPS15P9 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19G001236 1.9 FANTOM5 ENCODE dbSUPER 12.6 +50.9 50887 41.1 CREB3L1 MLX AGO1 ZFP64 DMAP1 FEZF1 YY1 SLC30A9 ZNF416 ZNF143 SF3A2 TMEM259 C19orf24 LOC100288123 CIRBP MIER2 MIDN ENSG00000267317 MUM1 RPS15
GH19G001353 1.1 ENCODE 13.2 -47.6 -47574 2.9 HDGF PKNOX1 CREB3L1 ARID4B DMAP1 FEZF1 ZNF2 YY1 SLC30A9 ZNF207 RPS15P9 EFNA2 MUM1 C19orf24 GC19P001362
GH19G001372 1 ENCODE 13.3 -66.2 -66183 2.1 MLX ARID4B DMAP1 ZNF48 YY1 SLC30A9 SP5 MXD4 PPARG KAT8 RPS15P9 EFNA2 MUM1 ENSG00000279488 GC19P001362
GH19G001357 0.6 ENCODE 13.2 -50.3 -50312 0.8 PKNOX1 ZNF341 SMC3 FEZF1 RBBP5 ZNF600 ZIC2 RAD21 RPS15P9 EFNA2 C19orf24 GC19P001362 MUM1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS15P9 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS15P9 Gene

Chromosome:
19
Start:
1,307,401 bp from pter
End:
1,307,745 bp from pter
Size:
345 bases
Orientation:
Minus strand

Genomic View for RPS15P9 Gene

Genes around RPS15P9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS15P9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS15P9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS15P9 Gene

Proteins for RPS15P9 Gene

Post-translational modifications for RPS15P9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS15P9 Gene

Domains & Families for RPS15P9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS15P9 Gene

Function for RPS15P9 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS15P9 Gene

Localization for RPS15P9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS15P9 Gene

Pathways & Interactions for RPS15P9 Gene

SuperPathways for RPS15P9 Gene

No Data Available

Interacting Proteins for RPS15P9 Gene

Gene Ontology (GO) - Biological Process for RPS15P9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS15P9 Gene

Transcripts for RPS15P9 Gene

mRNA/cDNA for RPS15P9 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS15P9 Gene

No ASD Table

Relevant External Links for RPS15P9 Gene

GeneLoc Exon Structure for
RPS15P9
ECgene alternative splicing isoforms for
RPS15P9

Expression for RPS15P9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS15P9 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS15P9 Gene:

RPS15P9
genes like me logo Genes that share expression patterns with RPS15P9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS15P9 Gene

Orthologs for RPS15P9 Gene

Evolution for RPS15P9 Gene

ENSEMBL:
Gene Tree for RPS15P9 (if available)
TreeFam:
Gene Tree for RPS15P9 (if available)

No data available for Orthologs for RPS15P9 Gene

Paralogs for RPS15P9 Gene

No data available for Paralogs for RPS15P9 Gene

Variants for RPS15P9 Gene

Relevant External Links for RPS15P9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS15P9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS15P9 Gene

Disorders for RPS15P9 Gene

No disorders were found for RPS15P9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS15P9 Gene

Publications for RPS15P9 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS15P9 Gene

Sources for RPS15P9 Gene

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