Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPS15AP6 Gene

Aliases for RPS15AP6 Gene

  • Ribosomal Protein S15a Pseudogene 6 2 3 5
  • RPS15A_1_18 3

External Ids for RPS15AP6 Gene

Previous GeneCards Identifiers for RPS15AP6 Gene

  • GC01U902364
  • GC01M021331

Summaries for RPS15AP6 Gene

GeneCards Summary for RPS15AP6 Gene

RPS15AP6 (Ribosomal Protein S15a Pseudogene 6) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS15AP6 Gene

Genomics for RPS15AP6 Gene

Regulatory Elements for RPS15AP6 Gene

Enhancers for RPS15AP6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F020997 0.2 Ensembl 0.4 +6.1 6064 1.0 HDGF PKNOX1 SIN3A ZNF48 YY1 GLIS2 FOS SP5 JUNB TBX21 HP1BP3 MIR1256 RPS15AP6
GH01F020992 0.2 Ensembl 0.4 +11.1 11064 1.0 PKNOX1 SIN3A FEZF1 ZNF121 GLIS2 KLF7 ZNF263 TSHZ1 ZNF623 ZNF610 MIR1256 RPS15AP6
GH01F021020 1.5 FANTOM5 Ensembl ENCODE 0.3 -18.2 -18180 2.6 HDGF PKNOX1 ARNT MLX ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 HP1BP3 MIR1256 NBPF2P EIF4G3 ECE1 CDA GC01P021023 RPS15AP6
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPS15AP6 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS15AP6 Gene

Chromosome:
1
Start:
21,003,511 bp from pter
End:
21,003,964 bp from pter
Size:
454 bases
Orientation:
Minus strand

Genomic View for RPS15AP6 Gene

Genes around RPS15AP6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS15AP6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS15AP6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS15AP6 Gene

Proteins for RPS15AP6 Gene

Post-translational modifications for RPS15AP6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS15AP6 Gene

Domains & Families for RPS15AP6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS15AP6 Gene

Function for RPS15AP6 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS15AP6 Gene

Localization for RPS15AP6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS15AP6 Gene

Pathways & Interactions for RPS15AP6 Gene

SuperPathways for RPS15AP6 Gene

No Data Available

Interacting Proteins for RPS15AP6 Gene

Gene Ontology (GO) - Biological Process for RPS15AP6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS15AP6 Gene

Transcripts for RPS15AP6 Gene

mRNA/cDNA for RPS15AP6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS15AP6 Gene

No ASD Table

Relevant External Links for RPS15AP6 Gene

GeneLoc Exon Structure for
RPS15AP6
ECgene alternative splicing isoforms for
RPS15AP6

Expression for RPS15AP6 Gene

mRNA expression in normal human tissues for RPS15AP6 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS15AP6 Gene:

RPS15AP6
genes like me logo Genes that share expression patterns with RPS15AP6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS15AP6 Gene

Orthologs for RPS15AP6 Gene

Evolution for RPS15AP6 Gene

ENSEMBL:
Gene Tree for RPS15AP6 (if available)
TreeFam:
Gene Tree for RPS15AP6 (if available)

No data available for Orthologs for RPS15AP6 Gene

Paralogs for RPS15AP6 Gene

No data available for Paralogs for RPS15AP6 Gene

Variants for RPS15AP6 Gene

Relevant External Links for RPS15AP6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS15AP6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS15AP6 Gene

Disorders for RPS15AP6 Gene

No disorders were found for RPS15AP6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS15AP6 Gene

Publications for RPS15AP6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS15AP6 Gene

Sources for RPS15AP6 Gene

Content
Loading form....